BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6h13
(701 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra... 24 5.3
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 23 9.3
>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
transcriptase protein.
Length = 1049
Score = 23.8 bits (49), Expect = 5.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 268 KVMYPSIYQNLLHFCKMINKPRSFFWVQCTSVNSLLKMF 384
KV IY+NLLH C+ P +V S + L F
Sbjct: 628 KVFELVIYKNLLHACRSYLSPYQHGFVPKKSTTTNLVEF 666
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 23.0 bits (47), Expect = 9.3
Identities = 12/51 (23%), Positives = 24/51 (47%)
Frame = +1
Query: 238 IIVKRFYYERKVMYPSIYQNLLHFCKMINKPRSFFWVQCTSVNSLLKMFQR 390
II+ ++Y + + + H M+N S ++V CT+ + K F +
Sbjct: 217 IILSQYYLQPDFQFCHTFA-YYHIIAMLNGFCSLWFVNCTAFGTASKAFAK 266
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,579
Number of Sequences: 2352
Number of extensions: 15657
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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