Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6h04
         (643 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70036-5|CAO78725.1|  712|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z70036-4|CAO78724.1|  733|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z70036-3|CAA93876.1|  757|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z81097-17|CAF31479.2|  269|Caenorhabditis elegans Hypothetical p...    30   1.2  
Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical pr...    29   2.1  
U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical p...    29   2.8  
AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical ...    29   2.8  
U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical...    28   4.9  
AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical...    28   4.9  
U80027-1|AAC48122.2|  338|Caenorhabditis elegans Serpentine rece...    28   6.5  
U80029-2|AAB37582.1|  150|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    27   8.6  

>Z70036-5|CAO78725.1|  712|Caenorhabditis elegans Hypothetical
           protein T01B4.2c protein.
          Length = 712

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 518 ISKRQSVCTLFTVVWSCFFLYFLMVVNSFRYTIW 619
           IS+ +   T F V W+ F ++F MVV S   + W
Sbjct: 303 ISEDEEQITTFPVKWALFIVFFFMVVCSLIVSFW 336


>Z70036-4|CAO78724.1|  733|Caenorhabditis elegans Hypothetical
           protein T01B4.2b protein.
          Length = 733

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 518 ISKRQSVCTLFTVVWSCFFLYFLMVVNSFRYTIW 619
           IS+ +   T F V W+ F ++F MVV S   + W
Sbjct: 324 ISEDEEQITTFPVKWALFIVFFFMVVCSLIVSFW 357


>Z70036-3|CAA93876.1|  757|Caenorhabditis elegans Hypothetical
           protein T01B4.2a protein.
          Length = 757

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +2

Query: 518 ISKRQSVCTLFTVVWSCFFLYFLMVVNSFRYTIW 619
           IS+ +   T F V W+ F ++F MVV S   + W
Sbjct: 348 ISEDEEQITTFPVKWALFIVFFFMVVCSLIVSFW 381


>Z81097-17|CAF31479.2|  269|Caenorhabditis elegans Hypothetical
           protein K07A1.16 protein.
          Length = 269

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
 Frame = +2

Query: 233 ISFLSFFWAAFELVTIDRFTTKMFLNHEQVLRYFKMIYIFGTVCLMIATGMLVLGTLVDT 412
           ++ L F+ + F +  + RF      ++ + L    ++   GT  L I   M  +GT++D 
Sbjct: 5   VASLIFYGSVFAICELLRFLVIKSFDNSKRLSALLILEFIGT--LQICVPMFDVGTILDN 62

Query: 413 YNLVNFYVWYAFLYL-SVYF 469
           Y L+  +V    + L + YF
Sbjct: 63  YGLLGVFVEITVIELANCYF 82


>Z48009-5|CAA88086.1|  329|Caenorhabditis elegans Hypothetical
           protein AH6.7 protein.
          Length = 329

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 14/56 (25%), Positives = 31/56 (55%)
 Frame = +2

Query: 323 LRYFKMIYIFGTVCLMIATGMLVLGTLVDTYNLVNFYVWYAFLYLSVYFVMAMFSV 490
           L +F+ I++F     + + G+ +LGT+ +      +Y W  ++Y ++ F+ A F +
Sbjct: 241 LTFFQFIFMF-----IYSFGVFLLGTIREIIGYEQYYFWVVWVY-TIPFIAASFPI 290


>U40799-9|AAA81488.2| 1292|Caenorhabditis elegans Hypothetical protein
            F42C5.10 protein.
          Length = 1292

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = -1

Query: 559  YHGEECAHGLSLRNSASRYHVH-TDTEHCHHKINGQIQKGIPHVEVHQIVGIHERAQNKH 383
            YH +E AH  S   +   +H H T  E+ HH  + Q +K I +        I  R  +K 
Sbjct: 964  YHQDENAHQHSTAENEHIHHYHTTSNENAHHHHSVQNEKDIQYQLAQSNQSI--RQMSKT 1021

Query: 382  SSGDHQADCPKNVDHLE 332
            ++ D Q        H+E
Sbjct: 1022 NNWDEQNIQSSKRAHIE 1038


>Z99281-26|CAE18029.1|  377|Caenorhabditis elegans Hypothetical
           protein Y57G11C.46 protein.
          Length = 377

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 589 HQKIKKKATPYHGEECAHGLSLRNSASRYHVHTDTEH 479
           H  +KK    YHG    +G+SL  +A  YHV T   +
Sbjct: 75  HPNVKKLLKTYHGAILMYGVSL-GTAQLYHVMTSMSY 110


>AL110485-5|CAB60375.1| 1002|Caenorhabditis elegans Hypothetical
           protein Y46G5A.6 protein.
          Length = 1002

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = -1

Query: 496 HTDTEHCHHKINGQIQKGIPHVEVHQIVGIHERAQNKHSS-GDHQADCPKNVDHLEVSQD 320
           H  TEH H   N    + +P  +  QI+G+ E+  +  +S   ++A   K + H   SQ 
Sbjct: 437 HVKTEHLHFFDNSY--RPVPLKQ--QIIGVTEKNDDSATSQAMNEAVYDKIMKHAGKSQV 492

Query: 319 LLVIQEHFRSEPINRDQFECCPEERKKRDQ*YGCLERDTATAFSR 185
           L+ +  H+R E             +  RD    CLE+DT +AF R
Sbjct: 493 LVFV--HYRKETTET--------AKAIRD---ACLEKDTLSAFMR 524


>U23523-8|AAC46563.1|   87|Caenorhabditis elegans Hypothetical
           protein F53A9.8 protein.
          Length = 87

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = -1

Query: 556 HGEECAHGLSLRNSASRYHVHTDTEHCHHKINGQIQKGIPHVEV-HQIVGIHERAQNKHS 380
           H +E  H     + A   HVH   +HC  +  G  Q G    +  HQ    HE+  + H 
Sbjct: 16  HHDEHHHEDHHEHGADGEHVHHAGDHCDTQHGGNHQAGEHCAKTQHQDGEHHEQHHDAHD 75

Query: 379 SGDHQA 362
           S  H +
Sbjct: 76  SHAHDS 81


>AC025716-21|AAT39978.1|  586|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18b protein.
          Length = 586

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 586 QKIKKKATPYHGEECAHGLSLRNSASRYHVHTDTEHCHHKINGQI 452
           +K KKK   Y  ++       ++S+SRY   T T H HH  +  I
Sbjct: 110 EKEKKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSI 154


>AC025716-20|AAT39977.2|  946|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.18a protein.
          Length = 946

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 586 QKIKKKATPYHGEECAHGLSLRNSASRYHVHTDTEHCHHKINGQI 452
           +K KKK   Y  ++       ++S+SRY   T T H HH  +  I
Sbjct: 470 EKEKKKNKIYEEKKVKTPKPPKSSSSRYSSETPTSHHHHHRSNSI 514


>U80027-1|AAC48122.2|  338|Caenorhabditis elegans Serpentine
           receptor, class j protein11 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 197 CGCIPLKAAVLLISFLSFFWAAFELVTIDR 286
           CGCI L   +L+I F+  +   F    IDR
Sbjct: 96  CGCISLSYGILVIHFIYRYLVLFNTRIIDR 125


>U80029-2|AAB37582.1|  150|Caenorhabditis elegans Hypothetical
           protein T20D4.15 protein.
          Length = 150

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 12/126 (9%)
 Frame = -1

Query: 604 KTVDNHQKIKKKAT--PYHGEECAHGLSLRNSASRYHVHTDTE--HCHHKINGQIQKGIP 437
           K VDN        T  PY  +    G+ L     +  V+   E   C  K+N +  K   
Sbjct: 24  KYVDNAINCMTALTCPPYTKDAKKQGIELTGKYRQTLVYFADEFPQCSEKLNARKSKCFD 83

Query: 436 HVEVHQIVGIHERAQNKHSSG------DHQADCPKN-VDHLEVSQDLLVIQEHFR-SEPI 281
           H ++++I    E  +N+H           + DC KN +      ++    +E+ R  E +
Sbjct: 84  HWDLNKIRATDEEKENQHKRSVTCEKYFGKGDCLKNEITEACGKKEWNKFREYMRIQEGV 143

Query: 280 NRDQFE 263
           N+  FE
Sbjct: 144 NKSNFE 149


>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/67 (28%), Positives = 25/67 (37%)
 Frame = -1

Query: 568 ATPYHGEECAHGLSLRNSASRYHVHTDTEHCHHKINGQIQKGIPHVEVHQIVGIHERAQN 389
           A  +HG    HG+   +  + Y  H    H HH   G      PH E H+  G H    +
Sbjct: 599 APAHHGHHGEHGVHHGHHGAGYGAH----HGHH---GAHHHHAPHHEHHEHHGDHHHGSH 651

Query: 388 KHSSGDH 368
               G H
Sbjct: 652 GVHHGHH 658


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,928,346
Number of Sequences: 27780
Number of extensions: 326516
Number of successful extensions: 1053
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)