Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6g19
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical pr...    40   7e-04
Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical p...    37   0.007
AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...    37   0.007
Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical pr...    33   0.15 
Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical p...    29   2.4  
Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical p...    29   2.4  

>Z92825-3|CAB07311.1|  531|Caenorhabditis elegans Hypothetical
           protein C13C4.5 protein.
          Length = 531

 Score = 40.3 bits (90), Expect = 7e-04
 Identities = 18/29 (62%), Positives = 23/29 (79%)
 Frame = +1

Query: 403 MTVSILCFVNLIXYMDRLTIAGVLNXVKT 489
           + V+IL  +NL+ YMDR TIAGVLN V+T
Sbjct: 57  VVVAILFIINLLNYMDRYTIAGVLNDVQT 85


>Z70307-11|CAA94337.1|  488|Caenorhabditis elegans Hypothetical
           protein C39E9.10 protein.
          Length = 488

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = +1

Query: 400 YMTVSILCFVNLIXYMDRLTIAGVLNXVKT 489
           Y++V+ L  VNL+ Y+DR T+AGVL  V+T
Sbjct: 8   YISVTALFVVNLLNYVDRYTVAGVLTQVQT 37


>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score = 37.1 bits (82), Expect = 0.007
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +1

Query: 397 QYMTVSILCFVNLIXYMDRLTIAGVLNXVKT 489
           +++T SIL  VNL+ YMDR TI GV++ + T
Sbjct: 22  KWVTCSILLLVNLLNYMDRYTIVGVMSRLAT 52


>Z69788-8|CAA93644.3|  483|Caenorhabditis elegans Hypothetical
           protein F09A5.1 protein.
          Length = 483

 Score = 32.7 bits (71), Expect = 0.15
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 400 YMTVSILCFVNLIXYMDRLTIAGVLNXVKT 489
           Y+++ IL  VNLI  +DR TIAGVL  V++
Sbjct: 8   YISIVILFVVNLINNVDRYTIAGVLPDVQS 37


>Z73896-8|CAA98061.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 485 LTXFKTPAIVNLS----M*XMRLTKHNIETVIYCEKVTSRRLLCLLACFS 348
           L     P IVN+     +   R +K     + +C +V  R LLCLL+C +
Sbjct: 421 LKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFCRRVQKRGLLCLLSCLT 470


>Z73422-12|CAJ76980.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.9 protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 485 LTXFKTPAIVNLS----M*XMRLTKHNIETVIYCEKVTSRRLLCLLACFS 348
           L     P IVN+     +   R +K     + +C +V  R LLCLL+C +
Sbjct: 421 LKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFCRRVQKRGLLCLLSCLT 470


>Z73422-11|CAA97768.1|  423|Caenorhabditis elegans Hypothetical
           protein B0564.6b protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 485 LTXFKTPAIVNLS----M*XMRLTKHNIETVIYCEKVTSRRLLCLLACFS 348
           L     P IVN+     +   R +K     + +C +V  R LLCLL+C +
Sbjct: 319 LKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFCRRVQKRGLLCLLSCLT 368


>Z73422-10|CAA97772.1|  525|Caenorhabditis elegans Hypothetical
           protein B0564.6a protein.
          Length = 525

 Score = 28.7 bits (61), Expect = 2.4
 Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -1

Query: 485 LTXFKTPAIVNLS----M*XMRLTKHNIETVIYCEKVTSRRLLCLLACFS 348
           L     P IVN+     +   R +K     + +C +V  R LLCLL+C +
Sbjct: 421 LKQLSLPGIVNVDDSVCLQISRCSKLTYLNINFCRRVQKRGLLCLLSCLT 470


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,810,903
Number of Sequences: 27780
Number of extensions: 145277
Number of successful extensions: 379
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 376
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 379
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)