Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6g16
         (683 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    24   5.1  
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...    23   6.8  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    23   6.8  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    23   6.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.8  
DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor prot...    23   9.0  

>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 10/45 (22%), Positives = 18/45 (40%)
 Frame = -2

Query: 652 KFINLCAKDXXXXXXXXXXLPSRYEMTVARANGPASPQRKLILFP 518
           K++  C K+           PSR+++  +   GP   +  L   P
Sbjct: 387 KYVGFCGKEYGTDFDIPALPPSRFDVAASGGVGPCFGEPPLPALP 431


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 25  FVKYVRYCKKINFFYIIHFVPNYS 96
           F + V   KK+    I+ FVPN+S
Sbjct: 99  FKQLVEEAKKLQLRIILDFVPNHS 122


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 355 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 453
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 275 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 307


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 355 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 453
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 275 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 307


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +1

Query: 355 DIFYDHTVYTGSAGMALYYYTSSLKMNDPSKEL 453
           D F  H+V     GMA+   T  L ++ PS EL
Sbjct: 253 DSFMAHSVLQVLKGMAMKGKTIILTIHQPSSEL 285


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
 Frame = +1

Query: 325 LQTLLSKIESDIFYDHT-----VYTGSAGMALYYYTSSLKMNDPSKE 450
           L    +K+ SD F   T       T   G  LY YT  L +N P KE
Sbjct: 787 LNKYCAKLPSDTFTKLTPIWRCATTVRKGRKLYQYTIRLPINSPWKE 833


>DQ103706-1|AAZ43087.1|  344|Anopheles gambiae pk-1 receptor
           protein.
          Length = 344

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 474 VDVIFYLQFFTGVIHFQRACIII 406
           + +I+ L F TGV+     CI+I
Sbjct: 48  ITIIYLLIFITGVVGNISTCIVI 70


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 653,509
Number of Sequences: 2352
Number of extensions: 12325
Number of successful extensions: 27
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68995575
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)