Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6g15
(615 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1410 - 26876243-26876497,26877129-26877239,26877240-268773... 82 3e-16
04_04_1401 + 33279092-33279286,33280223-33280306,33280459-332805... 46 2e-05
02_03_0401 - 18604244-18604303,18605059-18605346,18605459-186055... 42 3e-04
02_04_0035 + 19078267-19078479,19078588-19078674,19079792-190798... 39 0.003
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 38 0.006
11_06_0738 - 26807046-26807129,26807720-26807957,26809374-268115... 30 1.7
09_06_0146 + 21186889-21187178,21187321-21187435,21188595-211886... 30 1.7
11_03_0060 - 9406273-9407142 29 2.9
02_01_0266 - 1758439-1758599,1758682-1758769,1759363-1759564,175... 29 3.9
04_04_1351 - 32827136-32827984 28 5.1
02_05_1225 + 35060642-35060815,35061254-35061802,35062284-350623... 28 6.8
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 28 6.8
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 27 8.9
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 27 8.9
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 27 8.9
>08_02_1410 -
26876243-26876497,26877129-26877239,26877240-26877324,
26877620-26877672,26878318-26878440,26878514-26878597,
26878708-26878773,26879512-26879584,26879854-26879888,
26879970-26880212
Length = 375
Score = 82.2 bits (194), Expect = 3e-16
Identities = 43/115 (37%), Positives = 67/115 (58%), Gaps = 3/115 (2%)
Frame = +2
Query: 113 IEKEISETIPLVGEIEELQTLEKEYNE-DPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAF 289
+ K IS + +E L TL E+ PI K+K L +Y ++RRTR DGNCF+R+F
Sbjct: 103 LNKFISVVSIFILWMEPLSTLAAEFQSGSPILQEKIKLLGEQYDALRRTRGDGNCFYRSF 162
Query: 290 SYAYLERLL--TDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETFMEVIQRV 448
++YLE +L DK E ++ + + K L LG+ +FT EDF+ F++ ++ V
Sbjct: 163 MFSYLEHILETQDKAEVERILKKIEQCKKTLADLGYIEFTFEDFFSIFIDQLESV 217
>04_04_1401 +
33279092-33279286,33280223-33280306,33280459-33280524,
33280945-33281028,33281181-33281246,33281719-33281802,
33281955-33282020,33282323-33282388,33282667-33282726,
33282805-33282888,33282968-33283111,33283552-33283586,
33283694-33283746,33283828-33283928,33284516-33284974
Length = 548
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/138 (23%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Frame = +2
Query: 212 KVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDI----LV 379
K+ LS KY R DG+CF+RAF ++Y+ER++ + + ++ E+++ + I
Sbjct: 255 KITLLSEKYDFFRPVDRDGSCFYRAFIFSYMERIVAMQDDLERIIEVSRIGERIGKYKQA 314
Query: 380 ALGFSQFTVEDFYETFMEVIQRVGEHAGSTPDLIET-VRMELHDKFNKQGYSDYIVVYLR 556
F F + E F++ + + +LIE V +E + ++ + + +LR
Sbjct: 315 YARFGSFGIPQ--EEFLKALSAFEQ----LINLIEKGVAVEQLYQIDETDITKNSLRFLR 368
Query: 557 LITSGQLQTDQEFYQNFI 610
+T ++ T ++ Y+ F+
Sbjct: 369 FLTEIEICTHEDHYKGFL 386
>02_03_0401 -
18604244-18604303,18605059-18605346,18605459-18605562,
18605640-18605686,18605790-18605860,18606482-18606601,
18606686-18606856,18607304-18607393,18608949-18609041,
18609141-18609461
Length = 454
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Frame = +2
Query: 191 EDPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTD--KQEYDKFY----EI 352
+ P L++K LS Y R D CF+R+F ++YLE+++ +E D+ +
Sbjct: 188 QQPEVGLRLKYLSHHYSEFRPVHRDEECFYRSFIFSYLEQVVDSIGTREEDRLLAAVRAL 247
Query: 353 AKNSKDILVALGFSQFTVEDFYETFMEVIQRVGEHAGSTPDLIETVRMELHDKFNKQGYS 532
A ++++ A FSQ ++ F +I+++ I +R ++ + F+ +
Sbjct: 248 ATKAENLQWASEFSQ-----KHKAFERLIEKIKGWKRMQEHPISIIRGKILEFFSSYDTT 302
Query: 533 DYIVVYLRLITS 568
D I +LRL+ +
Sbjct: 303 DDIFAFLRLVAA 314
>02_04_0035 +
19078267-19078479,19078588-19078674,19079792-19079863,
19080338-19080526,19080599-19080718,19081348-19081430,
19081518-19081773,19081878-19082199,19086355-19086548,
19087135-19087227,19089327-19089497,19089580-19089699,
19090303-19090373,19090608-19090675,19091097-19091191
Length = 717
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Frame = +2
Query: 149 GEIEELQTLEKEYNEDPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLL--TD 322
G+I + L K E I ++++ L S Y ++R DG F+R+F ++YLE+++ D
Sbjct: 137 GDIHNVLRLSKRERESVI-IMRLVPLHSHYSALRPVYRDGESFYRSFIFSYLEQIVDRVD 195
Query: 323 KQEYDK 340
E D+
Sbjct: 196 MGEEDR 201
Score = 32.7 bits (71), Expect = 0.24
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 224 LSSKYKSIRRTRPDGNCFFRAFSYAYLERLL 316
L Y R PD CF+R+F ++YLE+++
Sbjct: 574 LDHDYSEFRPVVPDEECFYRSFIFSYLEQVV 604
>02_04_0001 -
18816492-18816741,18816881-18817050,18817244-18817388,
18817495-18817565,18817910-18817993,18818103-18818222,
18818310-18818480,18818955-18819044,18821893-18821985,
18822073-18822405
Length = 508
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Frame = +2
Query: 209 LKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLL--TDKQEYDKFYE----IAKNSKD 370
L + L ++Y +R R DG F+R+F ++YLE++ D +E D+ + +A ++
Sbjct: 198 LHLAHLDTRYSELRPVRRDGEGFYRSFMFSYLEQVADRVDTREEDRLLDAVRKLATRAEH 257
Query: 371 ILVALGFSQFTVEDFYETFMEVIQRVGEH 457
+ A FS+ E+ + F V + +H
Sbjct: 258 LQWASEFSR-RCEEMHHCFTIVARHRSQH 285
>11_06_0738 -
26807046-26807129,26807720-26807957,26809374-26811509,
26812145-26813253
Length = 1188
Score = 29.9 bits (64), Expect = 1.7
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 10/140 (7%)
Frame = +2
Query: 152 EIEELQTLEKEYNEDPIYLLKVKDL--SSKYKSIRRTRPDGNCFFRAFSYAYLERLLTDK 325
++ L + + + +D YL+ + L +S + I+ PDGN R + +E L
Sbjct: 354 KVHSLISSIRTHLQDKRYLIIIDGLWATSTWDVIKCALPDGNSSSRILTTTEIEDLALQS 413
Query: 326 QEYD-KFYEIAK-----NSKDILVALGFSQFT--VEDFYETFMEVIQRVGEHAGSTPDLI 481
YD KF K +S+ + ++ F + + ET +++++ G P I
Sbjct: 414 CSYDLKFIFKMKPFGEGDSRKLFFSIVFGSHSKCPPEVSETLYDIVRK----CGGLPLAI 469
Query: 482 ETVRMELHDKFNKQGYSDYI 541
TV L + KQ DYI
Sbjct: 470 VTVASLLASQLEKQEQLDYI 489
>09_06_0146 +
21186889-21187178,21187321-21187435,21188595-21188686,
21188839-21188952,21189139-21189193,21189348-21189458,
21190226-21190279,21190362-21190537,21190623-21190730,
21191332-21191405,21191500-21191675,21192169-21192264,
21192534-21192614,21192713-21192766,21193246-21193380,
21193453-21193533
Length = 603
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/45 (40%), Positives = 24/45 (53%)
Frame = +2
Query: 398 FTVEDFYETFMEVIQRVGEHAGSTPDLIETVRMELHDKFNKQGYS 532
F+ D Y ++V VG H T DLIE+VR E+ QG+S
Sbjct: 240 FSTNDGYS--LDVFVVVGWHDEETEDLIESVRKEIGKIDETQGWS 282
>11_03_0060 - 9406273-9407142
Length = 289
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/47 (38%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 95 MKQQREIEKEISETIPLVGEIEELQTLEKE---YNEDPIYLLKVKDL 226
+K R E ISE +GE++ELQTLE + E P ++++K+L
Sbjct: 52 LKYLRLSEVSISELPEQIGELQELQTLELQRTSIKELPKSIVRLKNL 98
>02_01_0266 -
1758439-1758599,1758682-1758769,1759363-1759564,
1759664-1759800,1760169-1760268,1760350-1760522,
1760797-1760941,1761018-1761139,1761225-1761470,
1761962-1762182,1762278-1762338,1762409-1762487,
1762572-1762651,1763221-1763292,1763382-1763449,
1763550-1763588,1763828-1763903,1763992-1764006
Length = 694
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Frame = +2
Query: 68 NSINQDELIMKQQREIEKEISETIPLVGEI-EELQTLEKEYNEDPIYLLKVKDLSSKYKS 244
N +D+ + K+ ++E+ + G + EE+Q L+ E N Y+ K SSK +S
Sbjct: 383 NKAARDKWLQKEIDDLERVLLSNRKQEGLLQEEIQKLKDEINNLNSYIESRKSESSKLES 442
Query: 245 -IRRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVA 382
+ + D N + ER K+E D EI + D++ A
Sbjct: 443 ALAKKHNDYNDLRKQRDELQEERKSFWKEEADVTAEIDRLKDDLVKA 489
>04_04_1351 - 32827136-32827984
Length = 282
Score = 28.3 bits (60), Expect = 5.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 601 LIKFLVXLQLARCNKTKVHHYVIRISLLVELIMKLHTNC 485
L+K + L A C T + V+ IS+ + + +KL NC
Sbjct: 233 LVKDIAGLSAAACLCTAIKAKVLDISIYIPIALKLLVNC 271
>02_05_1225 +
35060642-35060815,35061254-35061802,35062284-35062348,
35062417-35062957,35063321-35064610
Length = 872
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 2 SCYLKMADDASSSSGITGNTVENSINQDEL 91
S Y + D A SSS ITGN E S+ EL
Sbjct: 483 SSYSNLFDPAPSSSWITGNFKEPSVMPSEL 512
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 368 DILVALGFSQFTVEDFYETFMEVIQRVGEHAGSTPDLIETV 490
DI +A+G + E F E EVI+ + G PD++E V
Sbjct: 982 DIRLAMGAYYGSWEAFLEDVQEVIRNLHTAFGDRPDVLEMV 1022
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 27.5 bits (58), Expect = 8.9
Identities = 20/83 (24%), Positives = 34/83 (40%)
Frame = -2
Query: 380 RREYL*NFLLFRKTYHIPAYQSVSVPNMRMRTRERNNCHRDAFV*CFCISKTNLSL*ANK 201
R + NF + Y I + S N + TR R+ D + FCI+ +
Sbjct: 415 RANFCLNFFFYHMLYRIKLFGS----NWSVHTRTRHRYKVDYGMFRFCIADSEHDWREGT 470
Query: 200 SDPRYILSLKSAILQFHQPTVLF 132
++I S + + HQP ++F
Sbjct: 471 DQYKFIEQCLSTVDRKHQPWLIF 493
>07_03_1424 - 26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 27.5 bits (58), Expect = 8.9
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Frame = +2
Query: 20 ADDASSSSGITGNTVENSINQDELIMKQQREIEKEISET----IPLVGEIEELQTLEKE 184
AD+ S + +E + E I+KQQ+ +E+E++E + L E+E ++L E
Sbjct: 1320 ADEISDALVSVQRELEKKTSAMESILKQQKVLEEELAENGAALLILRSELEHSESLSSE 1378
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/41 (31%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 110 EIEKEISETIPLVGEIEE-LQTLEKEYNEDPIYLLKVKDLS 229
E KE+ E+ L+ ++EE + L++++NE+ L ++K+ S
Sbjct: 426 ESTKEVEESSSLIPQLEEEIPKLQEKFNEEEKVLEQIKENS 466
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,401,224
Number of Sequences: 37544
Number of extensions: 265179
Number of successful extensions: 718
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 717
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1478421500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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