Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6g15
(615 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical pr... 101 3e-22
U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical pr... 32 0.28
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.37
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 32 0.37
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 32 0.37
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 31 0.49
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 31 0.49
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 29 2.0
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 29 2.0
U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulat... 28 4.6
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 28 4.6
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical pr... 27 8.1
AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical ... 27 8.1
AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical... 27 8.1
>Z81039-6|CAB02772.1| 284|Caenorhabditis elegans Hypothetical
protein C25D7.8 protein.
Length = 284
Score = 101 bits (243), Expect = 3e-22
Identities = 65/204 (31%), Positives = 108/204 (52%), Gaps = 5/204 (2%)
Frame = +2
Query: 17 MADDASSSSGITGNTVENSINQDELIMKQQ--REIEKEISETIPLVGEIEELQTLEKEYN 190
MA++ S G E + DE++++ Q + IE E +++PLV + L EY+
Sbjct: 1 MANEPQKSDD-NGQAAEAVVTDDEIVLQDQQLKTIEDE-QKSVPLVATLAPFSILCAEYD 58
Query: 191 EDP--IYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNS 364
+ +L K +LS Y IR R DGNCF+RA +E +L D+ +KF +++
Sbjct: 59 NETSAAFLSKATELSEVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDW 118
Query: 365 KDILVALGFSQFTVEDFYETFMEVIQRVGEHAG-STPDLIETVRMELHDKFNKQGYSDYI 541
LV LGF +T DF + F+E ++++ H+G T + + T+ N G ++YI
Sbjct: 119 TRTLVELGFPDWTCTDFCDFFIEFLEKI--HSGVHTEEAVYTI-------LNDDGSANYI 169
Query: 542 VVYLRLITSGQLQTDQEFYQNFIE 613
+++ RLITS L+ + E Y FI+
Sbjct: 170 LMFFRLITSAFLKQNSEEYAPFID 193
>U64845-2|AAC48031.2| 980|Caenorhabditis elegans Hypothetical
protein F45F2.10 protein.
Length = 980
Score = 32.3 bits (70), Expect = 0.28
Identities = 20/68 (29%), Positives = 36/68 (52%)
Frame = +2
Query: 20 ADDASSSSGITGNTVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNEDP 199
A + SSS G T +N+ Q +L KQ++E+E++ E + G + +KE ++P
Sbjct: 155 AQPSCSSSKQNGKTAKNNFKQKQLTKKQRKELERKEFE---ISGAPAPIYPGQKERTKNP 211
Query: 200 IYLLKVKD 223
I + K+
Sbjct: 212 IEYVVEKE 219
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 44 GITGNTVENSI-NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 184
G G+ + +I NQ+EL+ KQ EIE+ E+ L+ + EE++ + E
Sbjct: 68 GECGSELRATIKNQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 31.9 bits (69), Expect = 0.37
Identities = 17/48 (35%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +2
Query: 44 GITGNTVENSI-NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 184
G G+ + +I NQ+EL+ KQ EIE+ E+ L+ + EE++ + E
Sbjct: 68 GECGSELRATIKNQEELLKKQSEEIERCKEESRMLIQQKEEMENIHSE 115
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 31.9 bits (69), Expect = 0.37
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +2
Query: 173 LEKEYNEDPIYLLKVKDLSSKYKSIRRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEI 352
+EK NE + + K D + K I DGNCF+RA S+ LT Q+Y K I
Sbjct: 695 VEKLENEKSVVMKKF-DRPGRVKGIES---DGNCFYRAISWC-----LTGSQKYHKALRI 745
Query: 353 A 355
A
Sbjct: 746 A 746
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 248 RRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETF 427
R PDGNCF+RA S+ +T Q + + A L F ++ + YE +
Sbjct: 599 RGITPDGNCFYRAISW-----WITGVQSHHMIFREAVGKHLKKNELMFKKYCHNEIYEKY 653
Query: 428 MEVIQRVG 451
+E R G
Sbjct: 654 VENAMRDG 661
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 31.5 bits (68), Expect = 0.49
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +2
Query: 248 RRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETF 427
R PDGNCF+RA S+ +T Q + + A L F ++ + YE +
Sbjct: 599 RGITPDGNCFYRAISW-----WITGVQSHHMIFREAVGKHLKKNELMFKKYCHNEIYEKY 653
Query: 428 MEVIQRVG 451
+E R G
Sbjct: 654 VENAMRDG 661
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 25/40 (62%)
Frame = +2
Query: 77 NQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNED 196
N++ I + ++++ ++ISE L +IE L L + YNE+
Sbjct: 990 NKNNQIDELKKQLNQKISEVNKLSSKIEALSQLNRTYNEE 1029
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/83 (25%), Positives = 37/83 (44%)
Frame = +2
Query: 248 RRTRPDGNCFFRAFSYAYLERLLTDKQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETF 427
R+ DGNCF+RA S+ LT + + + A F ++ ++ YE +
Sbjct: 326 RKIEADGNCFYRAVSW-----WLTGVESHHMIFREAVGKHLKKNEPKFKKYCHDEIYEKY 380
Query: 428 MEVIQRVGEHAGSTPDLIETVRM 496
++ + R G A ST ++ M
Sbjct: 381 VDNVMREGVWA-STCEIFAMANM 402
>U52072-1|AAD11465.1| 97|Caenorhabditis elegans dauer-upregulated
protein 191 protein.
Length = 97
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 427 KSFVKIFNGELRKP*GDENIF----RIFCYFVKLIIFLLISQ*AF 305
+S + N E KP G +NI+ FCYF +I+F+ S F
Sbjct: 27 QSICSVENVETEKPIGVKNIYIFCSFFFCYFCFVILFVFFSSPCF 71
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 28.3 bits (60), Expect = 4.6
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 62 VENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKEYNE 193
+ N I DE+ +++ + EKE++E I + EE EK+ E
Sbjct: 400 ISNEIPVDEISKEEEEKAEKELNEIIKELKSDEEAVDGEKDVGE 443
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/103 (21%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = +2
Query: 323 KQEYDKFYEIAKNSKDILVALGFSQFTVEDFYETFM--EVIQRV----GEHAGSTPDLIE 484
K E +F+ ++ +L +G +V FY+ + + R +GS +
Sbjct: 120 KPEGSRFFTLSPKIYGLLSDIGVKTHSVMKFYDEHVGSRSVNRSDLEPANLSGSQWVTAD 179
Query: 485 TVRMELHDKFNKQGYSDYIVVYLRLITSGQLQTDQEFYQNFIE 613
++ +L +KF+K+ Y I+ + L + +Q+F F E
Sbjct: 180 KLKKKLSEKFSKELYGQVIIAFEHLASLPGSAIEQKFLMEFRE 222
>Z68752-7|CAA92982.2| 693|Caenorhabditis elegans Hypothetical
protein T12G3.1 protein.
Length = 693
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 14 KMADDASSSSGITGNTVENSINQDELIMKQQREIEKEISETIPLVGEIEELQTLEKE 184
K A DA S + ++++ N EL +K +++KE+S L + +L E+E
Sbjct: 110 KKASDADRESK-SRSSLKRIENNQELTLKTLEKLQKELSRVSALETMVADLHAKERE 165
>AC024828-2|AAU87812.1| 462|Caenorhabditis elegans Hypothetical
protein Y55F3BL.2 protein.
Length = 462
Score = 27.5 bits (58), Expect = 8.1
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = +2
Query: 224 LSSKYKSIRRTRPDG-NCFFRAFSYAYLERLLT--DKQEYDKFYEIAKNSKDILVALGFS 394
L SK K+ ++ + G NCFF FS YLE + K K I K++ L F+
Sbjct: 2 LFSKKKTNKKLKNSGKNCFFFQFSAKYLEFSVNFPRKNSKKKLETIIFYEKNVEKTLFFT 61
Query: 395 QFTVEDFYETF 427
+ + F E F
Sbjct: 62 KQYFKFFNEKF 72
>AC006661-10|AAF39887.1| 843|Caenorhabditis elegans Hypothetical
protein H20J04.1 protein.
Length = 843
Score = 27.5 bits (58), Expect = 8.1
Identities = 21/93 (22%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Frame = +2
Query: 17 MADDASSSSGITGN--TVENSINQDELIMKQQREI---EKEISETIPLVGEIEELQTLEK 181
+ + SSS T + TV + +LI ++ E + + +G + L++ K
Sbjct: 387 LIESGSSSQDFTNSLSTVRRIVEYAKLINTSNPQVTNFENGYIDILNALGNLSSLKSAVK 446
Query: 182 EYNEDPIYLLKVKDLSSKYKSIRRTRPDGNCFF 280
EY + S Y S R+ NC+F
Sbjct: 447 EYRGSDEFTNAASSSVSGYHSRVRSMDKSNCYF 479
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,225,237
Number of Sequences: 27780
Number of extensions: 264640
Number of successful extensions: 848
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 844
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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