Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6g13
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK096804-1|BAC04866.1|  212|Homo sapiens protein ( Homo sapiens ...    30   5.0  
AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein prot...    30   6.6  

>AK096804-1|BAC04866.1|  212|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39485 fis, clone PROST2015124. ).
          Length = 212

 Score = 30.3 bits (65), Expect = 5.0
 Identities = 16/43 (37%), Positives = 20/43 (46%)
 Frame = +2

Query: 368 PSKPTVVLNRLPRAHRPGVPVSPQNQTMTTTASTAAECGISGA 496
           P KP     R P  H PG P  P+     + A++A   G SGA
Sbjct: 3   PRKPGTAERRRPSRHLPGSPWRPRWACSVSWAASALGVGSSGA 45


>AY312160-1|AAQ82434.1| 1569|Homo sapiens mucin glycoprotein
           protein.
          Length = 1569

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 444 WFCGETGTPGRCA-RGRRFNTTVGFDGRQQRYH 349
           W C E   PG C+  G  F TT  FD R  R+H
Sbjct: 385 WVCTERPCPGHCSLEGGSFVTT--FDARPYRFH 415


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,634,018
Number of Sequences: 237096
Number of extensions: 1572588
Number of successful extensions: 3679
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3679
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)