Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6g13
         (570 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical pr...    30   1.3  
Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z81137-10|CAB03470.2|  232|Caenorhabditis elegans Hypothetical p...    28   5.4  
Z81031-7|CAB02717.2|  267|Caenorhabditis elegans Hypothetical pr...    28   5.4  
AF499444-1|AAM27195.1|  945|Caenorhabditis elegans poly ADP-ribo...    27   9.5  
AC024200-15|AAF36011.1|  945|Caenorhabditis elegans Poly(adp-rib...    27   9.5  

>Z75544-1|CAA99881.1|  476|Caenorhabditis elegans Hypothetical
           protein K02A11.1a protein.
          Length = 476

 Score = 29.9 bits (64), Expect = 1.3
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -2

Query: 428 PARQADAREGGDSTRPWASMDANNDTTMKSGDHIFKFNRWKLKKTNLRNTQNK 270
           PAR    +EG D  R W+  D + D     G    +  R    K  L+++QNK
Sbjct: 363 PARIEAQKEGADILRTWSKEDVSADVHSSQGS--LQHQRESPSKRVLKSSQNK 413


>Z83107-6|CAD92391.1|  877|Caenorhabditis elegans Hypothetical
           protein F32A7.5c protein.
          Length = 877

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
 Frame = +2

Query: 365 RPSKPTVVLNRLPRAHRPGVPVSPQNQTMTTTASTAAECGI-SGAIIAEDAESAGIGTTR 541
           RP++P V     PRA     P  P   T T  A+ A    + S A +      A    TR
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313


>Z83107-5|CAD92390.1|  764|Caenorhabditis elegans Hypothetical
           protein F32A7.5b protein.
          Length = 764

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
 Frame = +2

Query: 365 RPSKPTVVLNRLPRAHRPGVPVSPQNQTMTTTASTAAECGI-SGAIIAEDAESAGIGTTR 541
           RP++P V     PRA     P  P   T T  A+ A    + S A +      A    TR
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313


>Z83107-4|CAB05498.1|  878|Caenorhabditis elegans Hypothetical
           protein F32A7.5a protein.
          Length = 878

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 18/60 (30%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
 Frame = +2

Query: 365 RPSKPTVVLNRLPRAHRPGVPVSPQNQTMTTTASTAAECGI-SGAIIAEDAESAGIGTTR 541
           RP++P V     PRA     P  P   T T  A+ A    + S A +      A    TR
Sbjct: 254 RPTRPAVPAASAPRALTSRAPAGPSRPTTTRNAAPAPRTAVPSRATVLTKTAPASKAPTR 313


>Z81137-10|CAB03470.2|  232|Caenorhabditis elegans Hypothetical
           protein W02D9.2 protein.
          Length = 232

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 328 MWSPLFIVVSLLASIEAHGRVESPP 402
           +W PLFI V L   ++ +G  ES P
Sbjct: 96  LWGPLFICVGLALLLQHNGGTESAP 120


>Z81031-7|CAB02717.2|  267|Caenorhabditis elegans Hypothetical
           protein C02D4.1 protein.
          Length = 267

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 12/42 (28%), Positives = 22/42 (52%)
 Frame = +1

Query: 349 VVSLLASIEAHGRVESPPSRASAWRAGFPTEPDYDDDGVNCG 474
           ++ ++ S EA     S  +  ++  +G  ++PDYD  G N G
Sbjct: 60  ILDVIKSFEADSSSNSDRAEPASTTSGASSDPDYDHIGTNGG 101


>AF499444-1|AAM27195.1|  945|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-1 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 499 NRGRCGICGDRYDAPTPRPHELG 567
           NRG+CG CG  ++    + H  G
Sbjct: 125 NRGKCGKCGQNFERGEIKAHNKG 147


>AC024200-15|AAF36011.1|  945|Caenorhabditis elegans
           Poly(adp-ribose) metabolism enzymeprotein 1 protein.
          Length = 945

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 499 NRGRCGICGDRYDAPTPRPHELG 567
           NRG+CG CG  ++    + H  G
Sbjct: 125 NRGKCGKCGQNFERGEIKAHNKG 147


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,477,560
Number of Sequences: 27780
Number of extensions: 260131
Number of successful extensions: 809
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)