Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6g09
(698 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0281 + 22014394-22015534,22016041-22017056 33 0.29
02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072 33 0.29
09_06_0287 + 22047404-22048409,22048754-22049967 32 0.50
04_04_0624 + 26676765-26676879,26676955-26677093,26678012-266780... 32 0.50
12_01_0950 - 9463148-9464358,9465326-9465644 30 1.5
09_06_0280 + 22010270-22011407,22011890-22013097 30 1.5
09_06_0278 + 21991016-21992120,21992341-21992702,21992766-219934... 30 1.5
08_02_1159 + 24773328-24773994,24775430-24775558,24776080-247762... 30 2.0
01_05_0760 - 24977608-24978708 29 2.7
09_06_0279 + 22001589-22002237,22002909-22004044,22006050-220070... 29 3.5
08_02_1156 - 24760332-24761530,24762757-24763648 29 4.7
03_02_0286 + 7100342-7100504,7100613-7100719,7102109-7102240,710... 29 4.7
02_02_0650 + 12644719-12645060,12645170-12645298,12646101-126465... 28 6.2
08_02_0423 - 16946435-16946542,16946924-16947045,16947442-169475... 28 8.2
>09_06_0281 + 22014394-22015534,22016041-22017056
Length = 718
Score = 32.7 bits (71), Expect = 0.29
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + + W +R++ +TET RA+ + S P I R +K
Sbjct: 534 SNGTLYHHLHVEGPMSLPWEDRLRIATETARALAYLHSAVSFPIIHRDIK 583
>02_05_1156 - 34528204-34529411,34529982-34530122,34530214-34531072
Length = 735
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL L + W +R++ +TET RA+ + S P I R +K
Sbjct: 487 SNGTLYHHLHVEGPLSLSWEDRLRIATETARALGYLHSAVSFPIIHRDIK 536
>09_06_0287 + 22047404-22048409,22048754-22049967
Length = 739
Score = 31.9 bits (69), Expect = 0.50
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + W +R++ +TET +A+ + S P I R +K
Sbjct: 489 SNGTLYSHLHVSGPRSLPWSDRLRIATETAKAIAYLHSSVSIPIIHRDIK 538
>04_04_0624 +
26676765-26676879,26676955-26677093,26678012-26678083,
26678174-26678317,26678402-26678530,26678819-26678938,
26679015-26679076,26679937-26680170,26680259-26680485,
26680551-26680683,26680787-26680944,26681139-26681351,
26681482-26681730
Length = 664
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 4/85 (4%)
Frame = +2
Query: 386 TLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLKMLMVY----HSIS 553
TL+ HL ++ W RMK + RA+ + + P L VY S
Sbjct: 452 TLYEHLHDGEGYQLSWPRRMKIALSIARALRYLHTEMQPPFAVAALTSSSVYLTEDFSPK 511
Query: 554 TLFFARWRALTAHPPSLVGRLDVNG 628
+ F RWRAL P G + VNG
Sbjct: 512 IIDFERWRALLTKPGLSSGSI-VNG 535
>12_01_0950 - 9463148-9464358,9465326-9465644
Length = 509
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + + W +R++ +TET RA+ + + P I R +K
Sbjct: 260 SNGTLYEHLHVDGPISLSWEDRLRIATETARALAYLHWAVAFPIIHRDIK 309
>09_06_0280 + 22010270-22011407,22011890-22013097
Length = 781
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + W +R++ +TET R++ + S P I R +K
Sbjct: 533 SNGTLYHHLHVEGPTSLPWEDRLRIATETARSLAYLHSAVSFPIIHRDIK 582
>09_06_0278 +
21991016-21992120,21992341-21992702,21992766-21993459,
21994064-21994191
Length = 762
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + W +R++ +TET R++ + S P I R +K
Sbjct: 501 SNGTLYHHLHVEGPTSLPWEDRLRIATETARSLTYLHSAVSFPIIHRDIK 550
>08_02_1159 +
24773328-24773994,24775430-24775558,24776080-24776220,
24777393-24777487,24777545-24778606
Length = 697
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + + W +R++ + E RA+ + S P +R +K
Sbjct: 446 SNGTLYHHLHVEGSISLPWDDRLRIALEVARALSYLHSSASMPIFYRDIK 495
>01_05_0760 - 24977608-24978708
Length = 366
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = -3
Query: 627 PFTSNLPTKDGGWAVNARHRAKNS 556
P++S+LPTKDG AR +A++S
Sbjct: 128 PYSSSLPTKDGRKQSRARRKARSS 151
>09_06_0279 +
22001589-22002237,22002909-22004044,22006050-22007058,
22007129-22007301,22007730-22008785
Length = 1340
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + + W R++ +TET RA+ + S P I R +K
Sbjct: 374 SNGTLYDHLHVEGQPSLPWEYRLRIATETARALAYLHSAVSFPIIHRDIK 423
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + W R++ +TET RA+ + S P I R +K
Sbjct: 1092 SNGTLYDHLHVEGPTSLPWEYRLRITTETARALAYLHSAVSFPIIHRDIK 1141
>08_02_1156 - 24760332-24761530,24762757-24763648
Length = 696
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 377 SEDTLHRHLRFLFKLEIDWIERMKKSTETDRAVLLENKDKSEPKIFRRLK 526
S TL+ HL + + W +R++ + E RAV + S P R +K
Sbjct: 450 SNGTLYDHLHVEGPMSVPWDDRLRIALEVARAVAYLHSASSMPIFHRDIK 499
>03_02_0286 +
7100342-7100504,7100613-7100719,7102109-7102240,
7102383-7102539,7103099-7103220
Length = 226
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 425 IDWIERMKKSTETDRAVLLENKDKSEPKIFRRLKMLM 535
+D +R+K ++E + A+L + +PK+ LKML+
Sbjct: 162 LDVSQRLKTASEVNAAILTSQSHEKDPKLPSLLKMLI 198
>02_02_0650 +
12644719-12645060,12645170-12645298,12646101-12646589,
12646718-12646777
Length = 339
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 398 HLRFLFKLEID--WIERMKKSTETDRAVLLENKDKSEPKIFRRLKMLMVYHSISTLFFAR 571
HLR L + E WI + + E +R L+ + S+P+ + R ++ V + + A
Sbjct: 183 HLRSLRRFEHSGGWIRALLEEAENERMHLMTFMEVSQPRWYERALVVAVQGAFFNAYLAS 242
Query: 572 WRALTAHPPSLVGRLD 619
+ +VG L+
Sbjct: 243 YLLSPRFAHRIVGYLE 258
>08_02_0423 -
16946435-16946542,16946924-16947045,16947442-16947504,
16949707-16949844,16950062-16950170,16950610-16950934,
16952482-16952645
Length = 342
Score = 27.9 bits (59), Expect = 8.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -3
Query: 609 PTKDGGWAVNARHRAKNSVLI 547
P +DGGW V+A H + + I
Sbjct: 191 PAEDGGWTVDAHHEERKGLYI 211
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,612,981
Number of Sequences: 37544
Number of extensions: 344452
Number of successful extensions: 711
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 711
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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