Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6g06
         (734 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containi...    34   0.23 
AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA...    34   0.23 
AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p pro...    31   2.2  
AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA...    31   2.2  
AE014296-415|AAF47615.1|  485|Drosophila melanogaster CG13810-PA...    30   3.8  
BT029293-1|ABK30930.1|  681|Drosophila melanogaster RT01152p pro...    29   5.0  
BT029292-1|ABK30929.1|  681|Drosophila melanogaster RT01151p pro...    29   5.0  
BT029291-1|ABK30928.1|  681|Drosophila melanogaster RT01150p pro...    29   5.0  
BT010123-1|AAQ22592.1|  489|Drosophila melanogaster AT19280p pro...    29   5.0  
AE014297-3156|AAF55998.2|  681|Drosophila melanogaster CG31160-P...    29   5.0  

>AF517634-1|AAM77747.1| 4876|Drosophila melanogaster BIR-containing
            ubiquitin-conjugatingenzyme protein.
          Length = 4876

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = +1

Query: 232  RMKQAKTDLHMKEIDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIF--EVKNE 405
            R+K AK    M +  E    T  + T +A+  F+V +   +  N + +GNQ+   E  + 
Sbjct: 3905 RIKDAKNQAAMNKDKE----TQTSSTNLASNIFNVDEFLLQSAN-AVNGNQLVIPEYSDI 3959

Query: 406  VKAKENSLGNILGHL-NSGEIIANPVAAFDVVTQ 504
            V A + ++  +L  L N+G  ++ P  +FD+V Q
Sbjct: 3960 VLAGDATISQVLASLQNAGHSLSTPCISFDLVLQ 3993


>AE014297-1135|AAF54520.3| 4876|Drosophila melanogaster CG6303-PA
            protein.
          Length = 4876

 Score = 33.9 bits (74), Expect = 0.23
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = +1

Query: 232  RMKQAKTDLHMKEIDEYIHVTNCTKTAIANPDFDVQDVGAEKFNLSFDGNQIF--EVKNE 405
            R+K AK    M +  E    T  + T +A+  F+V +   +  N + +GNQ+   E  + 
Sbjct: 3905 RIKDAKNQAAMNKDKE----TQTSSTNLASNIFNVDEFLLQSAN-AVNGNQLVIPEYSDI 3959

Query: 406  VKAKENSLGNILGHL-NSGEIIANPVAAFDVVTQ 504
            V A + ++  +L  L N+G  ++ P  +FD+V Q
Sbjct: 3960 VLAGDATISQVLASLQNAGHSLSTPCISFDLVLQ 3993


>AY119481-1|AAM50135.1| 1288|Drosophila melanogaster GH07148p
           protein.
          Length = 1288

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +1

Query: 145 RTYADQILLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEI-DEYIHVTNCTKTAIAN 321
           R + +   L +  D   ++V     +++   K  KT+LH+  + DE   +T  T   I  
Sbjct: 6   RKHMEDCFLRSPSDIRTTNVPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIHG 65

Query: 322 PDFDVQDVGAEK 357
           P+F + D+   K
Sbjct: 66  PEFQLDDISKYK 77


>AE014298-1522|AAF47973.2| 1288|Drosophila melanogaster CG1582-PA
           protein.
          Length = 1288

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 18/72 (25%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
 Frame = +1

Query: 145 RTYADQILLSNKQDTTQSSVLNIDSNESTRMKQAKTDLHMKEI-DEYIHVTNCTKTAIAN 321
           R + +   L +  D   ++V     +++   K  KT+LH+  + DE   +T  T   I  
Sbjct: 6   RKHMEDCFLRSPSDIRTTNVPAAPKSQAADNKSRKTELHVLRLNDESRQMTMDTLRQIHG 65

Query: 322 PDFDVQDVGAEK 357
           P+F + D+   K
Sbjct: 66  PEFQLDDISKYK 77


>AE014296-415|AAF47615.1|  485|Drosophila melanogaster CG13810-PA
           protein.
          Length = 485

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 12/28 (42%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
 Frame = -2

Query: 247 SLVSFLCFHSNQYSRHYFV-LCLVCLTI 167
           S+V+ LC +S++ S H F+ LCL+ +T+
Sbjct: 311 SIVALLCIYSDEQSEHCFLFLCLIYITM 338


>BT029293-1|ABK30930.1|  681|Drosophila melanogaster RT01152p
           protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 448 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHSYPNS 609
           +NS E    P+    +  Q  DLGGL+ E D   +  ++A       V S  +S
Sbjct: 245 MNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSS 298


>BT029292-1|ABK30929.1|  681|Drosophila melanogaster RT01151p
           protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 448 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHSYPNS 609
           +NS E    P+    +  Q  DLGGL+ E D   +  ++A       V S  +S
Sbjct: 245 MNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSS 298


>BT029291-1|ABK30928.1|  681|Drosophila melanogaster RT01150p
           protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 448 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHSYPNS 609
           +NS E    P+    +  Q  DLGGL+ E D   +  ++A       V S  +S
Sbjct: 245 MNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSS 298


>BT010123-1|AAQ22592.1|  489|Drosophila melanogaster AT19280p
           protein.
          Length = 489

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 448 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHSYPNS 609
           +NS E    P+    +  Q  DLGGL+ E D   +  ++A       V S  +S
Sbjct: 48  MNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSS 101


>AE014297-3156|AAF55998.2|  681|Drosophila melanogaster CG31160-PA
           protein.
          Length = 681

 Score = 29.5 bits (63), Expect = 5.0
 Identities = 16/54 (29%), Positives = 24/54 (44%)
 Frame = +1

Query: 448 LNSGEIIANPVAAFDVVTQTNDLGGLRNEKDSFKYEDINAKDDLGNEVHSYPNS 609
           +NS E    P+    +  Q  DLGGL+ E D   +  ++A       V S  +S
Sbjct: 245 MNSEEFFLPPIPQITMGEQRYDLGGLKRESDGHHHGPLSAGGGNSGSVGSLTSS 298


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,689,995
Number of Sequences: 53049
Number of extensions: 539777
Number of successful extensions: 1497
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3314233461
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)