Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f24
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 92 6e-20
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 36 0.005
SPAC19A8.12 |dcp2||mRNA decapping complex subunit Dcp2|Schizosac... 27 3.1
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom... 25 7.2
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 25 7.2
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 25 7.2
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 9.5
SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|ch... 25 9.5
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 25 9.5
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 92.3 bits (219), Expect = 6e-20
Identities = 45/104 (43%), Positives = 63/104 (60%)
Frame = +2
Query: 341 YDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRP 520
Y+ + + + +LIDVREPDE K G I S N+P+G I + ++SD+EF+KTY
Sbjct: 64 YNLSKRPTGDKSTVLIDVREPDEFKQ-GAIETSYNLPVGKIEEAM-KLSDEEFSKTYGFS 121
Query: 521 KPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSWTEWA 652
KP ++ YC +GRRS A + LG+KN NY GSW EW+
Sbjct: 122 KPVFEDNVVVYCRSGRRSTTASDILTKLGYKNIGNYTGSWLEWS 165
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 35.9 bits (79), Expect = 0.005
Identities = 28/120 (23%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Frame = +2
Query: 332 VADYDEVVKAISNNN---ILLIDVREPDEVKDH----------GHIPNSINIPL--GTIS 466
VA +D++VK I + + + ++D R + + GHIP SINIP T +
Sbjct: 162 VASFDDIVKVIESPDAAGVHIVDARAHERFLGNVPESRPGLASGHIPTSINIPFTETTAA 221
Query: 467 TVLGEMSDKEFNKTY-KRPKPNQNTELIFYCMAGRRSAKAQESAINLGFKNTKNYQGSWT 643
+ +++ K + +++ +I C +G ++ + GFK+ + Y SW+
Sbjct: 222 GITAPKPEEDLEKVFSSHGLTDKSVPIITSCGSGVTASVLFAALKECGFKDVRVYDESWS 281
>SPAC19A8.12 |dcp2||mRNA decapping complex subunit
Dcp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 26.6 bits (56), Expect = 3.1
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Frame = +2
Query: 230 NYARKQLSSNEYKAIPQLNALSLRLYSES----KVETKVADYDEVVKAISNNNILLIDVR 397
N + + +NE KA Q+ L ++ YS+S K ++ DE ++A + ++L + +
Sbjct: 598 NDLQNKSQNNERKASSQVKELEVKNYSKSTDLLKKTLRIPRNDEPLEAANQFDLLKVSPQ 657
Query: 398 EPDEV 412
+ EV
Sbjct: 658 QKSEV 662
>SPAC1296.03c |sxa2||serine carboxypeptidase
Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 100 SLLQFIHFIKRNCITTRHVSLWTSHNTVNNTKVS 201
SL F+ +++ +C+ T VSL S N N+ ++
Sbjct: 332 SLSNFLLYLENSCVITYDVSLDCSFNEYNDPLIT 365
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.4 bits (53), Expect = 7.2
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +2
Query: 431 PNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMAGRRSAKAQESAIN 601
PNS + TI++ E+ E + K E+ +C G + ++E AIN
Sbjct: 400 PNSKEV---TITSAPDEVEQDEAKSFHSSAKFQTEKEITDFCQKGVEESASEEEAIN 453
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.4 bits (53), Expect = 7.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +2
Query: 413 KDHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFY 553
K +GHI +I + +S+++GE ++ + K ++ E+I Y
Sbjct: 1406 KAYGHIERHRDILVNDLSSIIGESYNRAYGIMVKSQMLSELEEIIDY 1452
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.0 bits (52), Expect = 9.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 344 DEVVKAISNNNILLIDVREPDEVKDHGHIPNSIN 445
+E + ++ IL D+R PD V+ + H IN
Sbjct: 367 NEFLAGTADKRILQFDIRSPDIVQAYDHHLGGIN 400
>SPAC4F10.06 |||BUD22 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 388
Score = 25.0 bits (52), Expect = 9.5
Identities = 16/70 (22%), Positives = 29/70 (41%)
Frame = +2
Query: 332 VADYDEVVKAISNNNILLIDVREPDEVKDHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 511
V+ + +K I ++ D+V D+ H+ NS + +L DKE NK+
Sbjct: 163 VSSTQKPIKTIGKVDLSNKSTSNQDQV-DNTHVQNSTDGVNQDTGMILDNTEDKEINKSM 221
Query: 512 KRPKPNQNTE 541
N+ +
Sbjct: 222 SYSMKNEGVK 231
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 25.0 bits (52), Expect = 9.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 312 SEYNLRDKAFNCGIALYSFDDNCFR 238
S+ N+R +A N I LY++ N F+
Sbjct: 179 SDKNIRQEASNLSITLYAWVGNAFK 203
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,275,371
Number of Sequences: 5004
Number of extensions: 41190
Number of successful extensions: 144
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 142
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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