Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f24
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    28   0.30 
DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.      25   2.8  
AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha su...    25   2.8  
AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha su...    25   2.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.8  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 27.9 bits (59), Expect = 0.30
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = +2

Query: 164 GRRITQLIIRKSRTTSAGYLK--LNYARKQLSSN 259
           G+R+ Q++  K RTT+ GY +  +NYA + +  N
Sbjct: 538 GKRLQQMMPSKHRTTAEGYTQRPVNYAVETIEHN 571


>DQ182015-1|ABA56307.1|  353|Anopheles gambiae G(alpha)q2 protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = +2

Query: 41  VSSRDFFLRIFININVITIKAYFNLYT 121
           +++R+F LR+F+++N  + K  ++ +T
Sbjct: 297 IAAREFILRMFVDLNPDSEKIIYSHFT 323


>AY724805-1|AAW50314.1|  162|Anopheles gambiae G protein alpha
           subunit AgGq3 protein.
          Length = 162

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = +2

Query: 41  VSSRDFFLRIFININVITIKAYFNLYT 121
           +++R+F LR+F+++N  + K  ++ +T
Sbjct: 110 IAAREFILRMFVDLNPDSEKIIYSHFT 136


>AY724804-1|AAW50313.1|  163|Anopheles gambiae G protein alpha
           subunit AgGq2 protein.
          Length = 163

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 8/27 (29%), Positives = 20/27 (74%)
 Frame = +2

Query: 41  VSSRDFFLRIFININVITIKAYFNLYT 121
           +++R+F LR+F+++N  + K  ++ +T
Sbjct: 111 IAAREFILRMFVDLNPDSEKIIYSHFT 137


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
 Frame = +2

Query: 224 KLNYARKQLSSNEYKAIPQLNALSLRLYSESKVETKVADYD----EVVKAISNNNILLID 391
           K+ Y R+++  +   AIP +  +  R  +  ++    A  +    E+V+   NNN LL +
Sbjct: 64  KIGYIRREIVKDSV-AIPDMPEVIPRTPNSREIIDLEAQLEKTENEIVELSENNNALLQN 122

Query: 392 VREPDEVK 415
             E  E+K
Sbjct: 123 FMELTELK 130


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +2

Query: 311 ESKVETKVADYDEVVKAISNNNILLIDVR 397
           ++K +T   DY  VVK  +N+ +L+   R
Sbjct: 268 DTKYDTIEGDYPLVVKKSNNHTVLITQAR 296


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = +1

Query: 184  NNTKVSNYFRGLFEVELCTKTIIIE 258
            N  ++S+Y  G+++V+ CT ++ I+
Sbjct: 1250 NMFELSDYLVGIYKVKDCTDSVTIK 1274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,445
Number of Sequences: 2352
Number of extensions: 9251
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)