Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f23
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0117 + 12684729-12685886,12685978-12686145,12686292-126863... 36 0.039
10_08_1037 - 22477358-22478752 33 0.28
01_06_1783 + 39845998-39846174,39846260-39846534,39846758-398468... 31 0.85
12_02_1174 - 26696869-26698191 30 2.0
10_02_0194 + 6552638-6552895,6553088-6553246,6553551-6553702,655... 30 2.0
09_06_0081 + 20745627-20748144,20748211-20748308 29 2.6
06_03_0905 + 25843547-25844314 29 2.6
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718 29 2.6
07_03_1603 + 28080561-28080706,28080752-28080834,28082055-280820... 29 3.4
06_03_1310 + 29238644-29240260 29 3.4
06_01_0275 + 2029542-2029689,2029777-2030295,2030657-2030754,203... 29 3.4
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 29 3.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 29 4.5
10_02_0197 + 6596197-6596402,6596766-6596828,6599679-6599795,660... 28 6.0
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 28 6.0
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 7.9
05_04_0192 + 18936955-18937168,18937385-18937498,18937588-189376... 28 7.9
02_03_0012 - 13940583-13940853,13942281-13942509,13945275-139454... 28 7.9
>01_03_0117 +
12684729-12685886,12685978-12686145,12686292-12686336,
12686438-12687280
Length = 737
Score = 35.5 bits (78), Expect = 0.039
Identities = 21/80 (26%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 207 PPLMSPRSVPTPXIPR-GPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKAQ 383
PP +P ++ P+ P N +S ++ K ++ PP+ +P E PP P+K
Sbjct: 162 PPTKAPAAISPATPPQLSPANAHSTHHHAKPPSLPPAEPPVPSPSPEHPP-RHSPSKPPA 220
Query: 384 PGGIKPDTVCFHCAPTPGPP 443
KP T P P
Sbjct: 221 YAPAKPPTALRPAIPPAAMP 240
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/89 (26%), Positives = 31/89 (34%), Gaps = 6/89 (6%)
Frame = +3
Query: 195 HGRFPPLMSPRS--VPTPXIPRGPDNQYSKQYYYKRS----AINSVFPPIVAPVAEGPPM 356
H PP + P VP+P P + SK Y + A+ PP P
Sbjct: 188 HHAKPPSLPPAEPPVPSPSPEHPPRHSPSKPPAYAPAKPPTALRPAIPPAAMPKPPSVAP 247
Query: 357 NQDPTKKAQPGGIKPDTVCFHCAPTPGPP 443
Q P + P P + APT PP
Sbjct: 248 VQPPQRPPAPATKPPPSFPPQLAPTMPPP 276
>10_08_1037 - 22477358-22478752
Length = 464
Score = 32.7 bits (71), Expect = 0.28
Identities = 27/84 (32%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +3
Query: 207 PPLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPM--NQDPTKKA 380
PP P+ P P P +Q K + I PPI PVA PP+ +Q P
Sbjct: 242 PP--QPQHQHHPHRPLPPQHQQPKPPSMRLQKIRP--PPISTPVARPPPVHNHQIPNPNH 297
Query: 381 QPGGIKPDTVCFHCAPTPGPP-WS 449
P +P P PGPP W+
Sbjct: 298 NPAFHRPPPPQPMPMPMPGPPVWA 321
>01_06_1783 + 39845998-39846174,39846260-39846534,39846758-39846891,
39846992-39847116,39847312-39847494,39847610-39847644,
39847756-39847912,39847936-39848049,39848143-39848235,
39848316-39848455,39848606-39848676,39848759-39848839,
39851475-39851954,39852110-39852387,39853346-39854143
Length = 1046
Score = 31.1 bits (67), Expect = 0.85
Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Frame = +3
Query: 345 GPPMNQDPTKKAQ--PGGIKPDTVCFH-CAPTPGPPWS 449
GP + DP KK Q P G P C H C P P W+
Sbjct: 993 GPYRSTDPNKKTQRGPDGRPPPQDCLHWCMPGPVDTWN 1030
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 19/45 (42%)
Frame = +3
Query: 309 SVFPPIVAPVAEGPPMNQDPTKKAQPGGIKPDTVCFHCAPTPGPP 443
SV PP+V P + PP Q P+ P P P P PP
Sbjct: 169 SVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPSVKPPVVQPKPQPP 213
Score = 27.9 bits (59), Expect = 7.9
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 5/84 (5%)
Frame = +3
Query: 207 PPLMSPRSVPTPXI--PRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKA 380
PP++ P+ P P + P P ++ SV PP+V P + PP P+
Sbjct: 172 PPVVQPKPQPPPSLQPPSPPPPPPTRP--------PSVKPPVVQPKPQPPPTLPPPSPPP 223
Query: 381 QPGGIKPDTVCFHCA---PTPGPP 443
P + P T A P P PP
Sbjct: 224 PPPTVPPRTPGDTPAVVEPKPQPP 247
>10_02_0194 +
6552638-6552895,6553088-6553246,6553551-6553702,
6553741-6553804
Length = 210
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 2/51 (3%)
Frame = -2
Query: 404 IWLDPTGLCFLCWILVHGRTFRYRCHYWWKHRIYC--ASFIIILLGILVIR 258
I+L + L F CW LV + + + +W + C F +GI++ R
Sbjct: 70 IFLAGSSLTFACWYLVQSKVLKVYPYKYWSSMVTCLVGGFQTAFVGIILRR 120
>09_06_0081 + 20745627-20748144,20748211-20748308
Length = 871
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 1/68 (1%)
Frame = +3
Query: 210 PLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVF-PPIVAPVAEGPPMNQDPTKKAQP 386
P + R +P P +P P + S SV PP+ AP A PPM P
Sbjct: 499 PHLRVRHMPAPPVPTPPAP--APPVSTLPSPAPSVHTPPVTAPPATAPPMIAPPVATPPD 556
Query: 387 GGIKPDTV 410
P TV
Sbjct: 557 SASSPSTV 564
>06_03_0905 + 25843547-25844314
Length = 255
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/84 (27%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Frame = +3
Query: 201 RFPPLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVA-PVAEGPPMNQDPTKK 377
R PPL++P VP P+GP + + PP+ PV GPP+
Sbjct: 75 RPPPLVAPPKVPVTHPPKGP--------VTRPPPVTYPTPPVTTPPVVVGPPVTYPTPPV 126
Query: 378 AQPGGIKPDTVCFHCAPT--PGPP 443
P + V + P P PP
Sbjct: 127 TTPPVVVGPPVTYPTPPVTYPTPP 150
>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
Length = 336
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 6/49 (12%)
Frame = +3
Query: 207 PPLMSPRSVPTPXIPRGP------DNQYSKQYYYKRSAINSVFPPIVAP 335
PP +P S+P P GP D +YS YY + S + P +P
Sbjct: 241 PPAPAPMSMPMPMARPGPSSQGYIDEEYSPSYYNRSSPYEPYYYPQPSP 289
>07_03_1603 +
28080561-28080706,28080752-28080834,28082055-28082092,
28083639-28084051,28084390-28084458,28084868-28084871,
28086638-28086763
Length = 292
Score = 29.1 bits (62), Expect = 3.4
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 371 CWILVHGRTFRYRCHYWWKHRIYCASFIIILLGI 270
C+++ H + FR + W+HR+ II++L I
Sbjct: 137 CYMISHSKVFRQQDAANWQHRVIFPDEIIVMLRI 170
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.1 bits (62), Expect = 3.4
Identities = 29/91 (31%), Positives = 33/91 (36%), Gaps = 8/91 (8%)
Frame = +3
Query: 201 RFPPLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKA 380
R PP P S PTP P YS+ K S S PP + PP +
Sbjct: 393 RTPPTPPPPSSPTPSHLPPPPPTYSES--PKSSMPPSTSPP--SSHGASPPSSSSSPPTE 448
Query: 381 QPGGIKP--------DTVCFHCAPTPGPPWS 449
PG + P T H AP PG P S
Sbjct: 449 HPGYVLPPLTPPPPTTTPPGHHAPVPGTPSS 479
>06_01_0275 +
2029542-2029689,2029777-2030295,2030657-2030754,
2031718-2032028,2032560-2032631,2032729-2033398
Length = 605
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 294 RSAINSVFPPIVAPVAEGPPMNQDPTKKAQPGGIKPDTVCFHCAPTPGPPWSWD 455
RS ++S+ PP PP D + +P G + D H P P WD
Sbjct: 39 RSRVSSLLPPQAEESPSSPPPRID---QIEPSGWESDPATAHPQHLPFEPSGWD 89
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/80 (26%), Positives = 25/80 (31%), Gaps = 1/80 (1%)
Frame = +3
Query: 207 PPLM-SPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKAQ 383
PPL SP P P PR + +S + P A P PT +
Sbjct: 71 PPLAASPPPPPPPPPPRNSPSPPKPPSQAAQSPLPPTTTTTTPPTAPVPAAAPPPTAPSP 130
Query: 384 PGGIKPDTVCFHCAPTPGPP 443
P H P P PP
Sbjct: 131 YSAPSPTPTPTHTQPRPSPP 150
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.7 bits (61), Expect = 4.5
Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 2/81 (2%)
Frame = +3
Query: 207 PPLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPPMNQDPTKKAQP 386
PP +P PTP P N Y + FP AP PP Q + +
Sbjct: 117 PPAPAPPPTPTPKFPSSSANPSPPDAYPFTN--YPFFPNFAAP---PPPTQQQQQQPSGD 171
Query: 387 GGIK--PDTVCFHCAPTPGPP 443
GG+ P + PT PP
Sbjct: 172 GGLPTFPANISTLVHPTQRPP 192
>10_02_0197 +
6596197-6596402,6596766-6596828,6599679-6599795,
6600311-6600545,6600771-6600929,6601159-6601310,
6602511-6602571
Length = 330
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -2
Query: 404 IWLDPTGLCFLCWILVHGRTFRYRCHYWWKHRIYC--ASFIIILLGILVIR 258
I L + + CW LV + + + +W I C F + +GI++ R
Sbjct: 191 ILLVASSFAYACWYLVQSKVLKVYPYKYWSSMITCLVGGFQVAFVGIILRR 241
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +3
Query: 309 SVFPPIVAPVAEGPPMNQDPTKKAQPGGIKPDTVC-FHCAPTPGPPWSWDGHQYY 470
S +PP + + + PP T PGG P T C +P+ G + G YY
Sbjct: 326 SYYPPTPS-IGDVPPSPSSDTSPTTPGGGSPSTPCDTPPSPSSGTSPTTPGGGYY 379
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 27.9 bits (59), Expect = 7.9
Identities = 23/87 (26%), Positives = 30/87 (34%), Gaps = 2/87 (2%)
Frame = +3
Query: 207 PPLMSPRSVPTPXIPRGPDNQYSKQYYYKRSAINSVFPPIVAPVAEGPP--MNQDPTKKA 380
PP+ +P P P P+ Y + PP P PP + P
Sbjct: 668 PPVYAP--YPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVP---SPPEYAPEPPVYAP 722
Query: 381 QPGGIKPDTVCFHCAPTPGPPWSWDGH 461
P GI P + P PGPP G+
Sbjct: 723 YPPGITPSPPEYAPEPPPGPPGGGGGY 749
>05_04_0192 +
18936955-18937168,18937385-18937498,18937588-18937656,
18937807-18937826,18937932-18937984,18938082-18938139,
18938338-18938367,18938468-18938719
Length = 269
Score = 27.9 bits (59), Expect = 7.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 4/38 (10%)
Frame = +3
Query: 351 PMNQDPTKKAQPGG---IKPDTV-CFHCAPTPGPPWSW 452
P+N + TK+ G + PD + C+H A TPG W
Sbjct: 170 PLNLNNTKETLNNGEIQLDPDKIYCYHFAATPGYQLKW 207
>02_03_0012 -
13940583-13940853,13942281-13942509,13945275-13945476,
13945961-13946278,13947321-13947419
Length = 372
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/85 (21%), Positives = 36/85 (42%)
Frame = -2
Query: 302 CASFIIILLGILVIRATRYXXXXXXXXXXXXRKSSVKIVFST*QDITKNFKPFRDVSEIP 123
CA ++ ++ IL++RA + ++ +T +++ + F P +D E P
Sbjct: 194 CAGALLFIVSILLLRAAIFGILWVLLGKRVWFFPNINAEETTFRELVR-FWPEKDEGERP 252
Query: 122 LWLRHILHCKSINLQAKLLLVYMPD 48
W + + L LL + PD
Sbjct: 253 KWTSRLFYATVAVLVILLLRHHAPD 277
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,626,203
Number of Sequences: 37544
Number of extensions: 403106
Number of successful extensions: 1322
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1311
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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