Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f22
         (556 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   1.7  
DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific do...    23   8.9  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    23   8.9  
AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposa...    23   8.9  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 25.0 bits (52), Expect = 1.7
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 439 FHAVNEPSVEHNSAAYIAQSNSLLENEHI 353
           FH +NEP++ HN    +  SN+   N H+
Sbjct: 169 FHQMNEPNMPHN----VNYSNTGFNNSHM 193


>DQ137802-1|AAZ78363.1|  265|Anopheles gambiae female-specific
           doublesex protein protein.
          Length = 265

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 107 KFHSPCCTNAHSYCEK*CWTSKGLEVSAL 193
           K H   C     +CEK C T++   V AL
Sbjct: 54  KGHKRYCKYRTCHCEKCCLTAERQRVMAL 82


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = +2

Query: 107 KFHSPCCTNAHSYCEK*CWTSKGLEVSAL 193
           K H   C     +CEK C T++   V AL
Sbjct: 54  KGHKRYCKYRTCHCEKCCLTAERQRVMAL 82


>AF378002-1|AAL16724.1|  336|Anopheles gambiae putative transposase
           protein.
          Length = 336

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 155 IFHNKNAR*CNTDYEIWHEIVNCGEQDTIGLSTTTIDAE 39
           +F +K AR     + IW  I +CG++  + ++  T+ +E
Sbjct: 178 VFADKFAR----KFMIWQGICSCGKKTKVFVTNKTMTSE 212


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 503,786
Number of Sequences: 2352
Number of extensions: 9125
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51722361
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)