Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f22
         (556 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        25   0.51 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   1.2  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               23   2.7  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   2.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   8.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.4  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -1

Query: 310 NAPEPTRYSRLHSITIASRQPTSTTICSSF 221
           N+P PT  S  HS + AS  P + T  S +
Sbjct: 60  NSPSPTGSSPQHSGSSASTSPAARTTSSMY 89


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 9/36 (25%), Positives = 20/36 (55%)
 Frame = -3

Query: 113 EIWHEIVNCGEQDTIGLSTTTIDAENNVLKDQRNEN 6
           EI H++   G+ + + L+   +D+ N ++    N+N
Sbjct: 174 EIPHDVATTGKGELVSLTVQAMDSTNTMVYMVDNKN 209


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +2

Query: 287 IPCGLRRIHLLQPDETRL 340
           I C L + H++Q DE +L
Sbjct: 79  ITCALEKSHIIQNDEIQL 96


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +3

Query: 69  YRVLLAAINDLVPN 110
           +R+L+A +NDL+ N
Sbjct: 397 FRILIANVNDLIKN 410


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 8/25 (32%), Positives = 10/25 (40%)
 Frame = +2

Query: 98  SRAKFHSPCCTNAHSYCEK*CWTSK 172
           S   F+ PC      YC   C+  K
Sbjct: 197 SSISFYVPCIVMLGIYCRLYCYAQK 221


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 166  CPTLFFTIRMR 134
            CP L+FTI+ R
Sbjct: 1527 CPILYFTIQYR 1537


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 166  CPTLFFTIRMR 134
            CP L+FTI+ R
Sbjct: 1523 CPILYFTIQYR 1533


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,757
Number of Sequences: 438
Number of extensions: 2404
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15949830
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)