Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f19
         (598 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q95QT4 Cluster: Putative uncharacterized protein nhr-13...    35   1.7  
UniRef50_P53194 Cluster: Putative uncharacterized protein BRP1; ...    33   5.1  
UniRef50_Q3ITU9 Cluster: Probable DNA primase large subunit; n=1...    33   6.7  
UniRef50_O57525 Cluster: Cytochrome P450 17A1; n=35; Gnathostoma...    32   8.9  

>UniRef50_Q95QT4 Cluster: Putative uncharacterized protein nhr-138;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein nhr-138 - Caenorhabditis elegans
          Length = 410

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 410 HHRTP*CNSLEGHWRNSIFKASTHFCIRESEC 315
           H+ T  CN  +G +R S+++  T+FCI   +C
Sbjct: 26  HYGTVACNGCKGFFRRSVWEKRTYFCIANEDC 57


>UniRef50_P53194 Cluster: Putative uncharacterized protein BRP1;
           n=1; Saccharomyces cerevisiae|Rep: Putative
           uncharacterized protein BRP1 - Saccharomyces cerevisiae
           (Baker's yeast)
          Length = 125

 Score = 33.1 bits (72), Expect = 5.1
 Identities = 20/56 (35%), Positives = 28/56 (50%)
 Frame = -1

Query: 496 RLVYDSIVRAEVSGAFCFLRVCYRIKGKDTIELPDVTALKAIGVTVSSRPRRIFAF 329
           RLVY  I    ++G+    RVC++I GK   +  DV  + A+ V VS      F F
Sbjct: 63  RLVYGFISAVIIAGSPLRDRVCFQITGKGQAKQSDVWVIPAMPVYVSPFQEACFVF 118


>UniRef50_Q3ITU9 Cluster: Probable DNA primase large subunit; n=1;
           Natronomonas pharaonis DSM 2160|Rep: Probable DNA
           primase large subunit - Natronomonas pharaonis (strain
           DSM 2160 / ATCC 35678)
          Length = 352

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = +3

Query: 306 VADTLGLPNAKMRRGLEDTVTPMAFKAVTSGSSMVSFPLIL*HTRRKQNAPDTSARTMLS 485
           +A+ L    A +RR +ED   P  F+ VT G        +L   R  ++ PD SA +++S
Sbjct: 203 IAEPLDGELAAIRRQIEDLDPPTGFETVTPGLFPPCMRALLSRARDGESLPDESAFSLVS 262

Query: 486 Y 488
           +
Sbjct: 263 F 263


>UniRef50_O57525 Cluster: Cytochrome P450 17A1; n=35;
           Gnathostomata|Rep: Cytochrome P450 17A1 - Rana dybowskii
           (Dybovsky's frog) (Korean brown frog)
          Length = 519

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 16/48 (33%), Positives = 26/48 (54%)
 Frame = +1

Query: 292 RWRRMSRTHSDSRMQKCVEALKILLRQWPSRLLHQGVRWCPSL*FCNI 435
           +WR  SR+H D +  K + +L ++       LLH G +  P + FCN+
Sbjct: 28  KWRMGSRSHGDVKHPKSLPSLPVI-----GSLLHLGKKLPPHILFCNL 70


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,241,779
Number of Sequences: 1657284
Number of extensions: 10626361
Number of successful extensions: 22916
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22364
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22914
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)