Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f19
         (598 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    24   0.85 
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    24   0.85 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.0  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   4.5  
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   7.9  

>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 166 DCFFACFPYYYFLPKSNVLSTKQK 237
           +C   CF  Y+   KSN LS + K
Sbjct: 282 NCLSYCFNLYHLASKSNQLSREAK 305


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 166 DCFFACFPYYYFLPKSNVLSTKQK 237
           +C   CF  Y+   KSN LS + K
Sbjct: 282 NCLSYCFNLYHLASKSNQLSREAK 305


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 19/71 (26%), Positives = 26/71 (36%)
 Frame = +2

Query: 305 CRGHTRTPECKNASRP*RYCYANGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAV 484
           CR   +    +N   P R   A   + CY     G     S+  S++ +C RY  A D  
Sbjct: 590 CRPREQLTWRRNFHGPHRLA-ARSRRCCYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGN 648

Query: 485 IHQSCKDELSS 517
                 D L S
Sbjct: 649 DGNQSDDNLGS 659


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 19/71 (26%), Positives = 26/71 (36%)
 Frame = +2

Query: 305 CRGHTRTPECKNASRP*RYCYANGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAV 484
           CR   +    +N   P R   A   + CY     G     S+  S++ +C RY  A D  
Sbjct: 482 CRPREQLTWRRNFHGPHRLA-ARSRRCCYHAVAPGTDIRQSIALSRKKKCIRYMEAGDGN 540

Query: 485 IHQSCKDELSS 517
                 D L S
Sbjct: 541 DGNQSDDNLGS 551


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 525 GVSLLSSSLHDWCMTASCAQKYRVHSASFEYV 430
           G+  LS SL    +  +   K+RV SA  EY+
Sbjct: 398 GIQQLSQSLLPAIVELAEDSKWRVRSAIIEYM 429


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -2

Query: 570 QIM*VFSSGFVKVHTGVSLLSSSL 499
           Q +  F +GF  V TGVS ++  L
Sbjct: 272 QALLFFFAGFETVSTGVSFMAYEL 295


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,826
Number of Sequences: 336
Number of extensions: 2969
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)