Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f18
(659 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 313 8e-86
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 313 8e-86
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 313 8e-86
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 2.2
Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical pr... 29 2.9
U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpa... 29 2.9
Z14092-7|CAB54285.1| 274|Caenorhabditis elegans Hypothetical pr... 28 6.8
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 27 8.9
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 27 8.9
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 313 bits (768), Expect = 8e-86
Identities = 144/190 (75%), Positives = 164/190 (86%)
Frame = +1
Query: 4 KIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETL 183
K+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIETL
Sbjct: 9 KVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETL 68
Query: 184 IELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLN 363
LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PLN
Sbjct: 69 TALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPLN 128
Query: 364 MILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTK 543
MILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVTK
Sbjct: 129 MILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVTK 188
Query: 544 SKFDNLYGCR 573
SKFDNLYG R
Sbjct: 189 SKFDNLYGIR 198
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 569 VGESLLDGIKRATDIMIAGKVCVVA 643
+ ESL DGIKRATD+M+AGKV VVA
Sbjct: 197 IRESLPDGIKRATDVMLAGKVAVVA 221
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 313 bits (768), Expect = 8e-86
Identities = 144/190 (75%), Positives = 164/190 (86%)
Frame = +1
Query: 4 KIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETL 183
K+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIETL
Sbjct: 9 KVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETL 68
Query: 184 IELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLN 363
LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PLN
Sbjct: 69 TALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPLN 128
Query: 364 MILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTK 543
MILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVTK
Sbjct: 129 MILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVTK 188
Query: 544 SKFDNLYGCR 573
SKFDNLYG R
Sbjct: 189 SKFDNLYGIR 198
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 569 VGESLLDGIKRATDIMIAGKVCVVA 643
+ ESL DGIKRATD+M+AGKV VVA
Sbjct: 197 IRESLPDGIKRATDVMLAGKVAVVA 221
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 313 bits (768), Expect = 8e-86
Identities = 144/190 (75%), Positives = 164/190 (86%)
Frame = +1
Query: 4 KIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVLIETL 183
K+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVLIETL
Sbjct: 9 KVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVLIETL 68
Query: 184 IELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDGKPLN 363
LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG+PLN
Sbjct: 69 TALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDGQPLN 128
Query: 364 MILDDGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFREGLLKVPAINVNDSVTK 543
MILDDGGDLTNLVH KYP L ++G++EETTTGVHNL KM +G LKVPAINVNDSVTK
Sbjct: 129 MILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVNDSVTK 188
Query: 544 SKFDNLYGCR 573
SKFDNLYG R
Sbjct: 189 SKFDNLYGIR 198
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/25 (76%), Positives = 22/25 (88%)
Frame = +2
Query: 569 VGESLLDGIKRATDIMIAGKVCVVA 643
+ ESL DGIKRATD+M+AGKV VVA
Sbjct: 197 IRESLPDGIKRATDVMLAGKVAVVA 221
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -3
Query: 255 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 97
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
>Z69665-1|CAA93520.5| 1396|Caenorhabditis elegans Hypothetical protein
ZK897.1 protein.
Length = 1396
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = +2
Query: 467 YIICIKCSEKDF*KFLQS---TLTIQ*QKANSTTCMDVGESLLDGIKRATDIMIAGKVCV 637
++I + E+DF K+LQ+ +LT S +S + K++TD M+ +VCV
Sbjct: 1116 FVIDLNWPEEDFRKYLQTKMKSLTSDMISKVSDCTFTAFDSWMQRAKKSTDYMLPSEVCV 1175
>U50199-6|AAA91266.1| 470|Caenorhabditis elegans Vacuolar h atpase
protein 15 protein.
Length = 470
Score = 29.1 bits (62), Expect = 2.9
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 415 PDLLKDVKGITEETTTGVHNL 477
PDL DVK +TEE T VH+L
Sbjct: 316 PDLEDDVKFLTEELTLSVHDL 336
>Z14092-7|CAB54285.1| 274|Caenorhabditis elegans Hypothetical
protein R107.5b protein.
Length = 274
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +1
Query: 538 TKSKFDNLYGCRGVFARRNQKGNRHNDCRES 630
TK +FD + C F+ N K + N CRES
Sbjct: 60 TKRRFDKISACLENFSISNDKPSPINICRES 90
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 376 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFR 492
DG T +++ + D+ K + +E T G+ NLY M R
Sbjct: 403 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVR 440
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 376 DGGDLTNLVHTKYPDLLKDVKGITEETTTGVHNLYKMFR 492
DG T +++ + D+ K + +E T G+ NLY M R
Sbjct: 426 DGQPATCILYYRLADIFKQSSMVQQERT-GIQNLYNMVR 463
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,856,264
Number of Sequences: 27780
Number of extensions: 344594
Number of successful extensions: 905
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1476380920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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