Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f14
(570 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein. 59 4e-09
AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p pro... 59 4e-09
AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like fac... 59 4e-09
AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box bin... 59 4e-09
AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-P... 59 4e-09
AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-P... 59 4e-09
X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related fa... 34 0.12
X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related fa... 34 0.12
AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p pro... 34 0.12
AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA... 34 0.12
BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p pro... 29 3.3
BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p pro... 29 3.3
AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA... 29 3.3
AY069725-1|AAL39870.1| 321|Drosophila melanogaster LP03067p pro... 29 4.4
AE014296-2375|AAF49748.1| 321|Drosophila melanogaster CG7924-PA... 29 4.4
U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box bindi... 29 5.8
U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box bindi... 29 5.8
M38388-1|AAA28926.1| 353|Drosophila melanogaster TATA-consensus... 29 5.8
M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box bindi... 29 5.8
AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p pro... 29 5.8
AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA... 29 5.8
AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-P... 28 7.7
>DQ162845-1|ABA42953.1| 1715|Drosophila melanogaster TRF2 protein.
Length = 1715
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 1274 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 1313
>AY069554-1|AAL39699.1| 632|Drosophila melanogaster LD27895p
protein.
Length = 632
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 191 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 230
>AJ238442-1|CAB41475.1| 537|Drosophila melanogaster TBP-like factor
protein.
Length = 537
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 96 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 135
>AF136569-1|AAD28784.1| 632|Drosophila melanogaster TATA box
binding protein-relatedfactor 2 protein.
Length = 632
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 191 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 230
>AE014298-1172|AAF46368.2| 632|Drosophila melanogaster CG18009-PD,
isoform D protein.
Length = 632
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 191 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 230
>AE014298-1171|AAF46369.3| 632|Drosophila melanogaster CG18009-PA,
isoform A protein.
Length = 632
Score = 59.3 bits (137), Expect = 4e-09
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +1
Query: 442 QPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
QP D E E +DI+INNVVCSFSV CHL LR+IAL G NVE
Sbjct: 191 QPIADNEHE---LDIVINNVVCSFSVGCHLKLREIALQGSNVE 230
>X70838-1|CAA50186.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 430 LAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQI 546
L P QP E + + +I + N+V +FSV C L+L+ I
Sbjct: 31 LQPQQPVALVEPKDAQHEIRLQNIVATFSVNCELDLKAI 69
>X70837-1|CAA50185.1| 224|Drosophila melanogaster TBP-related
factor protein.
Length = 224
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 430 LAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQI 546
L P QP E + + +I + N+V +FSV C L+L+ I
Sbjct: 31 LQPQQPVALVEPKDAQHEIRLQNIVATFSVNCELDLKAI 69
>AY128483-1|AAM75076.1| 224|Drosophila melanogaster RE61442p
protein.
Length = 224
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 430 LAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQI 546
L P QP E + + +I + N+V +FSV C L+L+ I
Sbjct: 31 LQPQQPVALVEPKDAQHEIRLQNIVATFSVNCELDLKAI 69
>AE014134-1392|AAF52600.1| 224|Drosophila melanogaster CG7562-PA
protein.
Length = 224
Score = 34.3 bits (75), Expect = 0.12
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1
Query: 430 LAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQI 546
L P QP E + + +I + N+V +FSV C L+L+ I
Sbjct: 31 LQPQQPVALVEPKDAQHEIRLQNIVATFSVNCELDLKAI 69
>BT022775-1|AAY55191.1| 636|Drosophila melanogaster IP13956p
protein.
Length = 636
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 364 PYVLGHCVWICHGLPLPRGCPCSAL 290
PY LGHC W +G + +G S +
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPI 266
>BT022767-1|AAY55183.1| 636|Drosophila melanogaster IP13856p
protein.
Length = 636
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 364 PYVLGHCVWICHGLPLPRGCPCSAL 290
PY LGHC W +G + +G S +
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPI 266
>AE014296-3276|AAF49071.1| 636|Drosophila melanogaster CG7385-PA
protein.
Length = 636
Score = 29.5 bits (63), Expect = 3.3
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 364 PYVLGHCVWICHGLPLPRGCPCSAL 290
PY LGHC W +G + +G S +
Sbjct: 242 PYSLGHCAWFVYGALMKQGSTLSPI 266
>AY069725-1|AAL39870.1| 321|Drosophila melanogaster LP03067p
protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 250 VVVMATLIQENGIKELSKGTHGVVANHGISTHSVPTHMVPD 372
VVV T+ +N ++ + + NHGI +P H +P+
Sbjct: 71 VVVPPTVKSDNKVRVTRSVSDSGIPNHGIPNPGIPNHGIPN 111
>AE014296-2375|AAF49748.1| 321|Drosophila melanogaster CG7924-PA
protein.
Length = 321
Score = 29.1 bits (62), Expect = 4.4
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = +1
Query: 250 VVVMATLIQENGIKELSKGTHGVVANHGISTHSVPTHMVPD 372
VVV T+ +N ++ + + NHGI +P H +P+
Sbjct: 71 VVVPPTVKSDNKVRVTRSVSDSGIPNHGIPNPGIPNHGIPN 111
>U35147-1|AAA79092.1| 354|Drosophila melanogaster TATA-box binding
protein protein.
Length = 354
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 156 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 206
>U11718-1|AAA68629.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 155 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 205
>M38388-1|AAA28926.1| 353|Drosophila melanogaster
TATA-consensus-binding transcriptionfactor TFII protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 155 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 205
>M38082-1|AAA28931.1| 353|Drosophila melanogaster TATA-box binding
protein protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 155 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 205
>AY069663-1|AAL39808.1| 353|Drosophila melanogaster LD44083p
protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 155 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 205
>AE013599-3256|AAF46754.1| 353|Drosophila melanogaster CG9874-PA
protein.
Length = 353
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = +1
Query: 415 QAITELAPTQPAVDEEEETPEIDIMINNVVCSFSVKCHLNLRQIALNGVNVE 570
Q + P PA + P I + N+V + ++ C L+L++IAL+ N E
Sbjct: 155 QTMGPSTPMTPATPGSAD-PGIVPQLQNIVSTVNLCCKLDLKKIALHARNAE 205
>AE014297-3684|AAF56376.1| 2768|Drosophila melanogaster CG13648-PA
protein.
Length = 2768
Score = 28.3 bits (60), Expect = 7.7
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 349 VPTHMVPDHEYCETTAQTPSQRQAITELAPTQPAVDEEEET 471
VPT + P E T++ TP + T +P D E+ET
Sbjct: 1648 VPTTVAPAGEKIPTSSITPDEEPTATSAPVAKPDEDVEKET 1688
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,799,719
Number of Sequences: 53049
Number of extensions: 512846
Number of successful extensions: 1560
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1560
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2234671092
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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