Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f07
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0314 + 16669072-16669553,16669936-16671106,16671394-166720...    29   3.2  
02_05_0023 + 25138709-25138823,25139013-25139197,25139268-251393...    27   9.9  

>07_03_0314 +
           16669072-16669553,16669936-16671106,16671394-16672042,
           16672165-16672187
          Length = 774

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
 Frame = -2

Query: 206 LSFNHTTIQ-P*LPS*LTI*NLNYNSLT---PSRLPT*TLQ---VYLKLLTPSQPLYFNN 48
           L  N+ T Q P  P  +T  +L+ NSL+   PS L    L+   +Y   +T + P YF  
Sbjct: 488 LGSNNLTGQVPRFPVNITYFDLSNNSLSGPLPSDLGAPRLEELRLYSNYITGTIPAYFCQ 547

Query: 47  LKRLLNLFT 21
           L+RL N+F+
Sbjct: 548 LRRLSNMFS 556


>02_05_0023 +
           25138709-25138823,25139013-25139197,25139268-25139335,
           25139729-25140041,25140621-25140962,25140990-25141079
          Length = 370

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 5/46 (10%)
 Frame = -2

Query: 566 SVFFKTFKII----PI-FEI*SSVKCCLPLHLIYKLQHTPSTLAHI 444
           SV F TF +I    P+ +++   +K CL L   Y L H P T+ +I
Sbjct: 239 SVNFSTFLVIGTTSPVTYQVLGHLKTCLVLSFGYTLLHDPFTMRNI 284


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,779,093
Number of Sequences: 37544
Number of extensions: 247474
Number of successful extensions: 423
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 423
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)