Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f06
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calciu... 53 2e-07
L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calciu... 53 2e-07
Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein. 46 3e-05
U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calciu... 42 3e-04
Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical pr... 40 0.001
L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calciu... 40 0.001
U67955-4|AAB07584.2| 211|Caenorhabditis elegans Hypothetical pr... 37 0.016
AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical ... 36 0.021
Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical pr... 35 0.063
AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin pr... 35 0.063
AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin pr... 35 0.063
AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C pr... 35 0.063
AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical ... 34 0.083
Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 33 0.15
U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified vi... 33 0.15
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 33 0.15
U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical pr... 28 7.2
X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein. 28 7.2
U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 27 9.6
U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical pr... 27 9.6
AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine re... 27 9.6
>U41030-2|AAA82363.2| 191|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 1 protein.
Length = 191
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/184 (21%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Frame = +3
Query: 135 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMT 314
K S ++ + T+FT E+++ ++K RD + +++ + F+ +
Sbjct: 7 KLKSSQIRDLAEQTYFTEKEIKQ----WYKGFVRD---CPNGMLTEAGFQKIYKQFFPQG 59
Query: 315 D-SYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRE 491
D S V D + F +A+S+ RG+++E++ +AF YDL +G + R
Sbjct: 60 DPSDFASFVFKVFDENKDGAIEFHEFIRALSITSRGNLDEKLHWAFKLYDLDQDGFITRN 119
Query: 492 TMYQLMK---KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSL 662
M ++ K + + + + E ++ VD + + MD ++D + +F++ PS+
Sbjct: 120 EMLSIVDSIYKMVGSSVQLPEEENTPEKRVDRIFRMMDKNNDAQLTLEEFKEGAKADPSI 179
Query: 663 IESL 674
+ +L
Sbjct: 180 VHAL 183
>L33680-1|AAA85631.1| 191|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 191
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/184 (21%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Frame = +3
Query: 135 KKHGSMWMEIQKDTHFTFDELEKIMVIFFKIQKRDEKPAASDLISRSHFRDVLHTGLGMT 314
K S ++ + T+FT E+++ ++K RD + +++ + F+ +
Sbjct: 7 KLKSSQIRDLAEQTYFTEKEIKQ----WYKGFVRD---CPNGMLTEAGFQKIYKQFFPQG 59
Query: 315 D-SYMMERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRE 491
D S V D + F +A+S+ RG+++E++ +AF YDL +G + R
Sbjct: 60 DPSDFASFVFKVFDENKDGAIEFHEFIRALSITSRGNLDEKLHWAFKLYDLDQDGFITRN 119
Query: 492 TMYQLMK---KSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSL 662
M ++ K + + + + E ++ VD + + MD ++D + +F++ PS+
Sbjct: 120 EMLSIVDSIYKMVGSSVQLPEEENTPEKRVDRIFRMMDKNNDAQLTLEEFKEGAKADPSI 179
Query: 663 IESL 674
+ +L
Sbjct: 180 VHAL 183
>Z74036-5|CAA98489.3| 171|Caenorhabditis elegans Hypothetical
protein F55C10.1 protein.
Length = 171
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +3
Query: 324 MMERVMVALDRGTSPYVTMATFAKAISLY-LRGDIEERIAYAFTCYDLLGEGHLRRETMY 500
+++RV+ D + V F + IS + ++GD ++ +AF YD+ +G + ++
Sbjct: 54 LVQRVIDIFDEDGNGEVDFREFIQGISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELF 113
Query: 501 QLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDF 632
Q++K + +D ++ ++VD + D D DG I+F +F
Sbjct: 114 QVLKMMVGNNLKDSQLQ----QIVDKTILFHDKDGDGKISFQEF 153
>AY190131-1|AAO33925.1| 171|Caenorhabditis elegans CNB-1 protein.
Length = 171
Score = 45.6 bits (103), Expect = 3e-05
Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Frame = +3
Query: 324 MMERVMVALDRGTSPYVTMATFAKAISLY-LRGDIEERIAYAFTCYDLLGEGHLRRETMY 500
+++RV+ D + V F + IS + ++GD ++ +AF YD+ +G + ++
Sbjct: 54 LVQRVIDIFDEDGNGEVDFREFIQGISQFSVKGDKNTKLKFAFRIYDMDRDGFISNGELF 113
Query: 501 QLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDF 632
Q++K + +D ++ ++VD + D D DG I+F +F
Sbjct: 114 QVLKMMVGNNLKDSQLQ----QIVDKTILFHDKDGDGKISFQEF 153
>U55375-1|AAK82907.2| 199|Caenorhabditis elegans Neuronal calcium
sensor familyprotein 3 protein.
Length = 199
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/116 (19%), Positives = 59/116 (50%), Gaps = 3/116 (2%)
Frame = +3
Query: 336 VMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMKK 515
V D +++ + F A+S+ RG ++E++ +AF+ YD+ +G + ++ M ++
Sbjct: 78 VFNVFDDNHDGHISFSEFIAALSITSRGTLDEKLDWAFSLYDVDKDGFITKDEMADIVDA 137
Query: 516 SLAKASRDDDV---EEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIESL 674
+ ++ E+ ++ V+ + MD + DG + +F++ P ++++L
Sbjct: 138 IYSMIGNMLELPKDEDTPQKRVEKIFTNMDRNLDGQLTREEFKEGSKADPWIVQAL 193
>Z81072-1|CAB03019.1| 311|Caenorhabditis elegans Hypothetical
protein F30A10.1 protein.
Length = 311
Score = 41.5 bits (93), Expect = 5e-04
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +3
Query: 423 IEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLD 602
++ ++ YAF YD G+ L + + K + +RD+ + V+ +++ +++ DLD
Sbjct: 228 LQLKLKYAFRIYDYDGDELLGHDDL----SKMIRSLTRDELSDVEVEFIIERIIEEADLD 283
Query: 603 HDGVINFTDFRQCVLTTPSLIES 671
D INF +F V +P I +
Sbjct: 284 GDSSINFAEFEHVVSRSPDFIRT 306
>Z19155-3|CAA79558.2| 812|Caenorhabditis elegans Hypothetical
protein F54G8.2 protein.
Length = 812
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/115 (23%), Positives = 60/115 (52%), Gaps = 2/115 (1%)
Frame = +3
Query: 342 VALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLMKK-- 515
VA + P + + +SL E ++ F YD G G L + + ++++
Sbjct: 144 VANNDSQEPRIPLKPLICTLSLLEADTPENKLDVVFHVYDSDGNGFLDKSEIDGIIEQMM 203
Query: 516 SLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIESLGY 680
++A+ + D +E +++++ M+ +D D+DG+++F ++R+ LT L+ LG+
Sbjct: 204 NVARYQQWDTIE--LEQVIRQMMVDIDYDNDGIVSFDEWRRGGLTNIPLLVLLGF 256
>Z80216-5|CAB02282.1| 190|Caenorhabditis elegans Hypothetical
protein F10G8.5 protein.
Length = 190
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +3
Query: 330 ERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLM 509
E V D S ++ F AI++ G E+++ +AF YD+ G G + + M +++
Sbjct: 68 EHVFRTFDTDNSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKII 127
Query: 510 KK--SLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIESL 674
+ + +++ ++ ++ ++MD+++D + +F L L + L
Sbjct: 128 EAIYEMLGPEVTKSADDSPRKRAKMIFEKMDVNNDKELTLKEFVDGCLADKELFQIL 184
>L33681-1|AAA85632.1| 190|Caenorhabditis elegans neuronal calcium
binding protein protein.
Length = 190
Score = 40.3 bits (90), Expect = 0.001
Identities = 23/117 (19%), Positives = 54/117 (46%), Gaps = 2/117 (1%)
Frame = +3
Query: 330 ERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRRETMYQLM 509
E V D S ++ F AI++ G E+++ +AF YD+ G G + + M +++
Sbjct: 68 EHVFRTFDTDNSGFIDFKEFLLAINVTSSGTPEQKLEWAFRMYDIDGNGTIDEKEMIKII 127
Query: 510 KK--SLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIESL 674
+ + +++ ++ ++ ++MD+++D + +F L L + L
Sbjct: 128 EAIYEMLGPEVTKSADDSPRKRAKMIFEKMDVNNDKELTLKEFVDGCLADKELFQIL 184
>U67955-4|AAB07584.2| 211|Caenorhabditis elegans Hypothetical
protein C16H3.1 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.016
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 7/122 (5%)
Frame = +3
Query: 330 ERVMVALDRGTSPYVTMATFAKAISLYLRGDIEERIAYAFTCYDLLGEGHLRR------- 488
E V +D+ VT F S +G ++ER+ + FT YD G L
Sbjct: 81 ELVFKNIDQNRVGTVTFLDFITNYSKIAKGTLDERLDWIFTLYDTNRCGFLAYNEIFHVV 140
Query: 489 ETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDHDGVINFTDFRQCVLTTPSLIE 668
++MYQ+M SL A + ++ V I+ K +++ ++G ++ +F Q + ++
Sbjct: 141 KSMYQMMDSSLKPAV----LATICRQHVKIVFKNLNIANNGKVSKAEFLQRCRSDSDILA 196
Query: 669 SL 674
S+
Sbjct: 197 SM 198
>AF016435-6|AAB65882.1| 213|Caenorhabditis elegans Hypothetical
protein F59D6.7 protein.
Length = 213
Score = 36.3 bits (80), Expect = 0.021
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +3
Query: 426 EERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDH 605
++++ +AF YDL ++ RE ++++ S+ A+ D + ++ D L+ D D
Sbjct: 130 KDKLRFAFKMYDLNKNNYITREE-FKVILNSMVGANITSD---QLDKIADKTLEEADQDR 185
Query: 606 DGVINFTDF 632
DG I+F DF
Sbjct: 186 DGKISFEDF 194
>Z48585-7|CAA88482.1| 160|Caenorhabditis elegans Hypothetical
protein ZK673.7 protein.
Length = 160
Score = 34.7 bits (76), Expect = 0.063
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 423 IEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLD 602
+EE + AF YD G G++ + +++ + DD+V E E +D M+ +D D
Sbjct: 93 LEEELREAFRLYDKEGNGYINVSDLRDILR------ALDDNVSE---EELDEMIAEIDAD 143
Query: 603 HDGVINFTDFRQ 638
G ++F +F +
Sbjct: 144 GSGTVDFDEFME 155
>AJ132193-1|CAA10601.1| 149|Caenorhabditis elegans calmodulin
protein.
Length = 149
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 420 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 599
D EE I AF +D G G + + +M +L + D++V+E ++E D+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREA--------DI 131
Query: 600 DHDGVINFTDF 632
D DG +N+ +F
Sbjct: 132 DGDGQVNYEEF 142
>AF016429-2|AAB65364.1| 149|Caenorhabditis elegans Calmodulin
protein 1 protein.
Length = 149
Score = 34.7 bits (76), Expect = 0.063
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +3
Query: 420 DIEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDL 599
D EE I AF +D G G + + +M +L + D++V+E ++E D+
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMT-NLGEKLTDEEVDEMIREA--------DI 131
Query: 600 DHDGVINFTDF 632
D DG +N+ +F
Sbjct: 132 DGDGQVNYEEF 142
>AB079299-1|BAB84566.1| 160|Caenorhabditis elegans troponin C
protein.
Length = 160
Score = 34.7 bits (76), Expect = 0.063
Identities = 20/72 (27%), Positives = 37/72 (51%)
Frame = +3
Query: 423 IEERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLD 602
+EE + AF YD G G++ + +++ + DD+V E E +D M+ +D D
Sbjct: 93 LEEELREAFRLYDKEGNGYINVSDLRDILR------ALDDNVSE---EELDEMIAEIDAD 143
Query: 603 HDGVINFTDFRQ 638
G ++F +F +
Sbjct: 144 GSGTVDFDEFME 155
>AC024858-1|AAF60872.2| 196|Caenorhabditis elegans Hypothetical
protein Y71H2AL.1 protein.
Length = 196
Score = 34.3 bits (75), Expect = 0.083
Identities = 18/69 (26%), Positives = 31/69 (44%)
Frame = +3
Query: 426 EERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDH 605
E ++ +AFT YDL G + ++ ++ + D V + D ++ D D
Sbjct: 113 EAKLRFAFTMYDLNKSGTITKDEFQDILAMMIGVGVPKDQ----VNSIADRTMREADRDG 168
Query: 606 DGVINFTDF 632
DG I F +F
Sbjct: 169 DGFITFQEF 177
>Z70783-6|CAA94856.1| 195|Caenorhabditis elegans Hypothetical
protein ZK856.8 protein.
Length = 195
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/69 (26%), Positives = 38/69 (55%)
Frame = +3
Query: 426 EERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRMDLDH 605
++++ +AF YDL ++ RE ++++ S+ A+ D + ++ D ++ D D
Sbjct: 112 KDKLLFAFKMYDLNKNDYITREE-FKVILNSMVGANITSD---QLDKIADRTIEEADADR 167
Query: 606 DGVINFTDF 632
DG I+F +F
Sbjct: 168 DGKISFDEF 176
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical
protein F44A6.1b protein.
Length = 467
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Frame = +3
Query: 447 FTCYDLLGEG---HLRRETMYQL-MKKSLAKASRDDDVEEAVKELV---DIMLKRMDLDH 605
F +DL G+G E+++QL ++K + + DDD++E +E+ + ++K++D++
Sbjct: 262 FALHDLNGDGFWNDFELESLFQLELEKMYNETNPDDDMKERAEEMYRMREHVMKQIDVNQ 321
Query: 606 DGVINFTDF 632
D +I+ +F
Sbjct: 322 DRMISMQEF 330
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical
protein F44A6.1a protein.
Length = 453
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Frame = +3
Query: 447 FTCYDLLGEG---HLRRETMYQL-MKKSLAKASRDDDVEEAVKELV---DIMLKRMDLDH 605
F +DL G+G E+++QL ++K + + DDD++E +E+ + ++K++D++
Sbjct: 262 FALHDLNGDGFWNDFELESLFQLELEKMYNETNPDDDMKERAEEMYRMREHVMKQIDVNQ 321
Query: 606 DGVINFTDF 632
D +I+ +F
Sbjct: 322 DRMISMQEF 330
>U40423-5|AAA81454.2| 156|Caenorhabditis elegans Unidentified
vitellogenin-linkedtranscript protein 2 protein.
Length = 156
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/73 (30%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Frame = +3
Query: 417 GDI-EERIAYAFTCYDLLGEGHLRRETMYQLMKKSLAKASRDDDVEEAVKELVDIMLKRM 593
G+I E+ + F +DL G+G+++RE + +M+K + ++ +D+ +D M +
Sbjct: 16 GEIREDDLKGIFREFDLNGDGYIQREELRAVMQK-MGQSPTEDE--------LDAMFQAA 66
Query: 594 DLDHDGVINFTDF 632
D D DG I+F +F
Sbjct: 67 DKDCDGNIDFQEF 79
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/69 (27%), Positives = 42/69 (60%), Gaps = 7/69 (10%)
Frame = +3
Query: 447 FTCYDLLGEG---HLRRETMYQL-MKKSLAKASRDDDVEEAVKELV---DIMLKRMDLDH 605
F +DL G+G E+++QL ++K + + DDD++E +E+ + ++K++D++
Sbjct: 265 FALHDLNGDGFWNDFELESLFQLELEKMYNETNPDDDMKERAEEMYRMREHVMKQIDVNQ 324
Query: 606 DGVINFTDF 632
D +I+ +F
Sbjct: 325 DRMISMQEF 333
>U28731-1|AAA68298.1| 145|Caenorhabditis elegans Hypothetical
protein F12A10.5 protein.
Length = 145
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = +3
Query: 579 MLKRMDLDHDGVINFTDF 632
M+K+ DLDHDG+I+F +F
Sbjct: 121 MIKQGDLDHDGMIDFQEF 138
>Z77653-1|CAB01124.1| 218|Caenorhabditis elegans Hypothetical
protein C13C12.1 protein.
Length = 218
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 561 KELVDIMLKRMDLDHDGVINFTDF 632
+E VD M+K +D+D DG I++ +F
Sbjct: 188 EEEVDEMIKEVDVDGDGEIDYEEF 211
>X04259-1|CAA27814.1| 161|Caenorhabditis elegans cal-1 protein.
Length = 161
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +3
Query: 561 KELVDIMLKRMDLDHDGVINFTDF 632
+E VD M+K +D+D DG I++ +F
Sbjct: 131 EEEVDEMIKEVDVDGDGEIDYEEF 154
>U23177-2|AAA64331.2| 538|Caenorhabditis elegans Hypothetical
protein C56G2.4 protein.
Length = 538
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +3
Query: 96 DSALDPMEEIRFRKKHGSMWMEIQKDTHFT 185
D +DP+E R RK+ W +Q D +T
Sbjct: 122 DPDMDPVEPFRIRKRPEITWSGLQYDEQYT 151
>Z82268-1|CAB05197.3| 508|Caenorhabditis elegans Hypothetical
protein F52B11.1a protein.
Length = 508
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -3
Query: 372 RKETCLGRELPSHVPSCMNPSCLNQYEAHL 283
RK T L E H C+NP+C+ YE+ +
Sbjct: 145 RKRTQLNAEPDKHPRQCLNPNCI--YESRI 172
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 84 STSLDSALDPMEEIRFRKKHGSMW 155
ST D P+EE+R R KH W
Sbjct: 1674 STECDQTKKPVEEVRCRTKHCPRW 1697
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +3
Query: 84 STSLDSALDPMEEIRFRKKHGSMW 155
ST D P+EE+R R KH W
Sbjct: 1674 STECDQTKKPVEEVRCRTKHCPRW 1697
>U58738-1|AAB00602.1| 290|Caenorhabditis elegans Hypothetical
protein F31A9.4 protein.
Length = 290
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = -1
Query: 617 NHSIVIQIHTLQHNVNEFLDRLFDVIISRRFRKTLLHELIHR 492
+H IV L N+ F D++ + + + K L LIHR
Sbjct: 167 DHPIVTSAKLLVFNIATFFDKIRNTRVHFTYSKRTLRNLIHR 208
>AF016446-4|AAC24164.1| 321|Caenorhabditis elegans Serpentine
receptor, class h protein23 protein.
Length = 321
Score = 27.5 bits (58), Expect = 9.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 530 RFRKTLLHELIHRFSS*VTFAEKIVTCKRISDTFFNITT 414
R++ ++L+ +RF+ + F C I DTFF I T
Sbjct: 115 RYKASILNYKTYRFTYFIKFTVYFTRCISIFDTFFVILT 153
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,024,269
Number of Sequences: 27780
Number of extensions: 311949
Number of successful extensions: 970
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 969
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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