Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6f05
(689 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 194 5e-50
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 194 5e-50
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 194 5e-50
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 164 5e-41
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 164 5e-41
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 143 1e-34
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 143 1e-34
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 134 6e-32
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 134 6e-32
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 134 6e-32
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 89 4e-18
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 89 4e-18
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 72 4e-13
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 72 4e-13
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 72 4e-13
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 72 4e-13
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 72 4e-13
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 72 4e-13
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 71 1e-12
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 71 1e-12
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 67 1e-11
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 66 2e-11
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 66 2e-11
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 66 2e-11
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 65 5e-11
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 65 5e-11
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 60 2e-09
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 59 3e-09
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 58 4e-09
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 58 4e-09
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 58 4e-09
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 57 1e-08
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 56 2e-08
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 55 6e-08
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 55 6e-08
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 54 7e-08
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 54 7e-08
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 54 1e-07
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 54 1e-07
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 51 7e-07
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 51 9e-07
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 51 9e-07
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 50 2e-06
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 48 5e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 48 5e-06
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 48 5e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 48 5e-06
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 48 8e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 47 1e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 1e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 47 1e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 1e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 46 3e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 46 3e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 45 4e-05
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 45 4e-05
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 44 1e-04
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 44 1e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 43 2e-04
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 43 2e-04
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 42 3e-04
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 42 3e-04
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 41 7e-04
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 41 0.001
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 41 0.001
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 41 0.001
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 40 0.002
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 38 0.005
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 38 0.005
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 38 0.005
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 38 0.005
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 37 0.012
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 37 0.012
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 37 0.012
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 37 0.012
U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna b... 37 0.016
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 37 0.016
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.021
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 36 0.021
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 36 0.021
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 36 0.021
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 36 0.021
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 36 0.036
Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical pr... 35 0.048
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.048
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 35 0.063
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 35 0.063
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 35 0.063
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 34 0.083
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 33 0.19
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 33 0.25
AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain (... 33 0.25
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 31 0.59
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 31 0.59
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 1.0
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 1.0
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 31 1.0
U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated p... 31 1.0
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 31 1.0
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 31 1.0
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 31 1.0
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 31 1.0
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.4
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 30 1.4
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 30 1.4
Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical p... 30 1.8
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 30 1.8
U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 30 1.8
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 30 1.8
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z74041-7|CAA98518.2| 335|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical p... 28 5.5
U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical pr... 28 5.5
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 28 5.5
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 28 5.5
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 28 5.5
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 28 5.5
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 28 7.2
U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 9.6
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 27 9.6
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 194 bits (473), Expect = 5e-50
Identities = 85/164 (51%), Positives = 119/164 (72%)
Frame = +3
Query: 198 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 378 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLR 557
S VD A RPH IDG+ V+PKRAVPR++ R E++ + K+L+V+G+++D E+ L
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLT 131
Query: 558 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQ 689
EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ+
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/100 (21%), Positives = 54/100 (54%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
+T+ VD+ + H ++G + ++ + ++E+ + +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 194 bits (473), Expect = 5e-50
Identities = 85/164 (51%), Positives = 119/164 (72%)
Frame = +3
Query: 198 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 378 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLR 557
S VD A RPH IDG+ V+PKRAVPR++ R E++ + K+L+V+G+++D E+ L
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLT 131
Query: 558 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQ 689
EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ+
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/100 (21%), Positives = 54/100 (54%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
+T+ VD+ + H ++G + ++ + ++E+ + +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 194 bits (473), Expect = 5e-50
Identities = 85/164 (51%), Positives = 119/164 (72%)
Frame = +3
Query: 198 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI D++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 378 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLR 557
S VD A RPH IDG+ V+PKRAVPR++ R E++ + K+L+V+G+++D E+ L
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLT 131
Query: 558 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQQ 689
EYF+ +G + ++ DK T K RGFGFV FDD+D VD+ LQ+
Sbjct: 132 EYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQK 175
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/100 (21%), Positives = 54/100 (54%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
+T+ VD+ + H ++G + ++ + ++E+ + +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 199
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 164 bits (399), Expect = 5e-41
Identities = 70/137 (51%), Positives = 101/137 (73%)
Frame = +3
Query: 279 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 458
++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 459 VPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFG 638
VPR++ R E++ + K+L+V+G+++D E+ L EYF+ +G + ++ DK T K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 639 FVEFDDYDPVDRVCLQQ 689
FV FDD+D VD+ LQ+
Sbjct: 121 FVTFDDHDSVDQCVLQK 137
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/100 (21%), Positives = 54/100 (54%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
+T+ VD+ + H ++G + ++ + ++E+ + +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 161
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 164 bits (399), Expect = 5e-41
Identities = 70/137 (51%), Positives = 101/137 (73%)
Frame = +3
Query: 279 LKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 458
++EFY Q+GEI D++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 459 VPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFG 638
VPR++ R E++ + K+L+V+G+++D E+ L EYF+ +G + ++ DK T K RGFG
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFG 120
Query: 639 FVEFDDYDPVDRVCLQQ 689
FV FDD+D VD+ LQ+
Sbjct: 121 FVTFDDHDSVDQCVLQK 137
Score = 56.4 bits (130), Expect = 2e-08
Identities = 21/100 (21%), Positives = 54/100 (54%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
+T+ VD+ + H ++G + ++ + ++E+ + +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSKAQ 161
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 143 bits (346), Expect = 1e-34
Identities = 63/163 (38%), Positives = 104/163 (63%)
Frame = +3
Query: 192 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 371
++S D + K+FIGGL ++TT +L++++ ++GE+ + +VM+DP TKR++GFGFI
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 372 TYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEED 551
T+ VD+ NNR H++DG+ ++PK A P+ + + KK+F+ GL ED
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLED 149
Query: 552 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
+++YF T+G + ++ DK T + RGFGFV FD + D+VC
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/81 (38%), Positives = 55/81 (67%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 407
T+K+FIGGL +T +K+++E +G++ D ++M D T+R +GFGF+T+ + D+
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 408 NNRPHKIDGRIVEPKRAVPRE 470
H+I+G++VE K+A P+E
Sbjct: 193 EIHFHEINGKMVECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 143 bits (346), Expect = 1e-34
Identities = 63/163 (38%), Positives = 104/163 (63%)
Frame = +3
Query: 192 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFI 371
++S D + K+FIGGL ++TT +L++++ ++GE+ + +VM+DP TKR++GFGFI
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 372 TYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEED 551
T+ VD+ NNR H++DG+ ++PK A P+ + + KK+F+ GL ED
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPKR--TQAKLVTKTKKVFIGGLSATSTLED 149
Query: 552 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
+++YF T+G + ++ DK T + RGFGFV FD + D+VC
Sbjct: 150 MKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Score = 74.9 bits (176), Expect = 5e-14
Identities = 31/81 (38%), Positives = 55/81 (67%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 407
T+K+FIGGL +T +K+++E +G++ D ++M D T+R +GFGF+T+ + D+
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 408 NNRPHKIDGRIVEPKRAVPRE 470
H+I+G++VE K+A P+E
Sbjct: 193 EIHFHEINGKMVECKKAQPKE 213
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 134 bits (324), Expect = 6e-32
Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Frame = +3
Query: 210 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAH 389
++ P RKLFIGGL + TTD L ++ QWG +VD +V++DP TK S+GFGF+T++
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 101
Query: 390 MVDEAQNNRPHKIDGRIVEPKRAVPREEIKR---PEASATVK----KLFVAGLKQDIEEE 548
+ A N+RPHK+ G+ V+ KRA+PRE++ P T KL + G+ +
Sbjct: 102 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 161
Query: 549 D-LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
D LR YF TFG + V ++ G+ RG GFV ++D + DR CL
Sbjct: 162 DSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 201
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 134 bits (324), Expect = 6e-32
Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Frame = +3
Query: 210 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAH 389
++ P RKLFIGGL + TTD L ++ QWG +VD +V++DP TK S+GFGF+T++
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 121
Query: 390 MVDEAQNNRPHKIDGRIVEPKRAVPREEIKR---PEASATVK----KLFVAGLKQDIEEE 548
+ A N+RPHK+ G+ V+ KRA+PRE++ P T KL + G+ +
Sbjct: 122 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 181
Query: 549 D-LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
D LR YF TFG + V ++ G+ RG GFV ++D + DR CL
Sbjct: 182 DSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 221
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 134 bits (324), Expect = 6e-32
Identities = 68/166 (40%), Positives = 99/166 (59%), Gaps = 8/166 (4%)
Frame = +3
Query: 210 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAH 389
++ P RKLFIGGL + TTD L ++ QWG +VD +V++DP TK S+GFGF+T++
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 122
Query: 390 MVDEAQNNRPHKIDGRIVEPKRAVPREEIKR---PEASATVK----KLFVAGLKQDIEEE 548
+ A N+RPHK+ G+ V+ KRA+PRE++ P T KL + G+ +
Sbjct: 123 SAESAMNDRPHKLGGKTVDSKRAIPREQMSSMIPPPFFETDPAPGCKLLLNGITNGVHSV 182
Query: 549 D-LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
D LR YF TFG + V ++ G+ RG GFV ++D + DR CL
Sbjct: 183 DSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADR-CL 222
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 88.6 bits (210), Expect = 4e-18
Identities = 48/152 (31%), Positives = 73/152 (48%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 410
+K+F+GG+ + L + Q+GE+ V D RS+GF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 411 NRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
R I G+ VE K A RE KK+FV GL D E+DLR +F FG +
Sbjct: 89 AREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 591 VSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
+ DK+T +R F F+ F++ + D+ Q
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 410
+K+F+GGL ++ L+ +EQ+G++ D+ D +TK + F FI + + D+A +
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 411 NRPHKIDGRIVEPKRAVPR 467
R + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 88.6 bits (210), Expect = 4e-18
Identities = 48/152 (31%), Positives = 73/152 (48%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 410
+K+F+GG+ + L + Q+GE+ V D RS+GF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 411 NRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
R I G+ VE K A RE KK+FV GL D E+DLR +F FG +
Sbjct: 89 AREQTIKGKSVEVKPAKSREN----------KKVFVGGLPSDYSEQDLRSHFEQFGKVDD 138
Query: 591 VSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
+ DK+T +R F F+ F++ + D+ Q
Sbjct: 139 IEWPFDKQTKARRNFAFIVFEEEESADKASSQ 170
Score = 52.0 bits (119), Expect = 4e-07
Identities = 23/79 (29%), Positives = 43/79 (54%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 410
+K+F+GGL ++ L+ +EQ+G++ D+ D +TK + F FI + + D+A +
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 411 NRPHKIDGRIVEPKRAVPR 467
R + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FGFV +
Sbjct: 492 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 651 DD 656
++
Sbjct: 548 EN 549
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FGFV +
Sbjct: 492 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 651 DD 656
++
Sbjct: 548 EN 549
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FGFV +
Sbjct: 421 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 476
Query: 651 DD 656
++
Sbjct: 477 EN 478
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 71.7 bits (168), Expect = 4e-13
Identities = 43/140 (30%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRGFGFVEF 650
SV+ D++ GK RG FV F
Sbjct: 171 CSVLRDQD-GKSRGCAFVTF 189
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/68 (33%), Positives = 41/68 (60%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 GFGFITYS 380
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FGFV +
Sbjct: 492 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 547
Query: 651 DD 656
++
Sbjct: 548 EN 549
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNN 413
+++GGLD + ++S L E Q G +V V + KD T +GFGF+ + D A +
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 414 RPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSV 593
K+ G+ ++ +A E K + A + FV L +++E+ L + FS FG I+ V
Sbjct: 75 NMIKLYGKPIKVNKASAHE--KNMDVGANI---FVGNLDPEVDEKLLYDTFSAFGVILQV 129
Query: 594 -SVVTDKETGKKRGFGFVEFDDYDPVD 671
++ D ++G +GF F+ F ++ D
Sbjct: 130 PKIMRDVDSGTSKGFAFINFASFEASD 156
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVV-VMKDPKTKRSKGFGFITYSQAHMVDEA 404
+F+G LD + L + + +G I+ V +M+D + SKGF FI ++ D A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 70.5 bits (165), Expect = 1e-12
Identities = 44/147 (29%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNN 413
+++GGLD + ++S L E Q G +V V + KD T +GFGF+ + D A +
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 414 RPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSV 593
K+ G+ ++ +A E K + A + FV L +++E+ L + FS FG I+ V
Sbjct: 85 NMIKLYGKPIKVNKASAHE--KNMDVGANI---FVGNLDPEVDEKLLYDTFSAFGVILQV 139
Query: 594 -SVVTDKETGKKRGFGFVEFDDYDPVD 671
++ D ++G +GF F+ F ++ D
Sbjct: 140 PKIMRDVDSGTSKGFAFINFASFEASD 166
Score = 35.5 bits (78), Expect = 0.036
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVV-VMKDPKTKRSKGFGFITYSQAHMVDEA 404
+F+G LD + L + + +G I+ V +M+D + SKGF FI ++ D A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 168
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 66.9 bits (156), Expect = 1e-11
Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 2/149 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
L + G+D++TTD ++++E G +V + K SKGFGF+ S ++
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEI-KRKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 417 PHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFG-NIVSV 593
H IDGR + K R++ RP ++ ++FV L ++E LR+ F + +
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRP----SISRIFVGRLTDKVDEHQLRKVFGDEAKSYIET 289
Query: 594 SVVTDKETGKK-RGFGFVEFDDYDPVDRV 677
+VVTD K RGF FV + +R+
Sbjct: 290 AVVTDVFIPKPFRGFAFVTLSSAEAAERI 318
Score = 32.7 bits (71), Expect = 0.25
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Frame = +3
Query: 180 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKE-FYEQWGEIVDVVVMKDPKT-KRS 353
++K + D P +R +F+G L + + L++ F ++ ++ V+ D K
Sbjct: 243 DVKVPDGRDKQGRPSISR-IFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPF 301
Query: 354 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREE 473
+GF F+T S A + + ++G V A PREE
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 66.5 bits (155), Expect = 2e-11
Identities = 40/134 (29%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQGA 115
Query: 414 RPH-KIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVS 590
+ K+ + P + P + R E +KLF+ L + EE+LRE F+ FG+I
Sbjct: 116 LHNIKVIEGMHHPVQMKPADTENRNE-----RKLFIGQLSKKHNEENLREIFAKFGHIED 170
Query: 591 VSVVTDKETGKKRG 632
SV+ D++ GK RG
Sbjct: 171 CSVLRDQD-GKSRG 183
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
+ MKP+++ E + RKLFIG L + + +L+E + ++G I D V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 357 G 359
G
Sbjct: 183 G 183
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 66.1 bits (154), Expect = 2e-11
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+F+ L + ++GEI VVM D + K KGFGF+ ++ +A
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAAGQA 294
Query: 417 PHKIDGRIVEP---KRAVPREEIKRPEASATVKK-----------------LFVAGLKQD 536
K++ I+E K +V R + K+ E SA +K+ L+V +++D
Sbjct: 295 VEKLNDSILEGTDCKLSVCRAQ-KKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEED 353
Query: 537 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+ ++ LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 354 LNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+FI LD + S+ + + +G I+ V D + SKG+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIE-- 203
Query: 417 PHKIDGRIVEPKRAV-----PREEIKRPEASATVK--KLFVAGLKQDIEEEDLREYFSTF 575
K++G ++ K+ PR + + + +K +FV + +++E L FS F
Sbjct: 204 --KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKF 261
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEFDDYD 662
G I S V+TD + GK +GFGFV F D D
Sbjct: 262 GEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
L++ ++ D L++ + +G I VM D + RSKGFGF+ + + A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 417 PHKIDGRIVEPKRAVPREEIKRPE-ASATVKKL 512
K+ G R+E +R + AS +++L
Sbjct: 404 NSKMIGAKPLYVALAQRKEDRRAQLASQYMQRL 436
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 66.1 bits (154), Expect = 2e-11
Identities = 48/159 (30%), Positives = 80/159 (50%), Gaps = 20/159 (12%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+F+ L + ++GEI VVM D + K KGFGF+ ++ +A
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFAD----QDAAGQA 294
Query: 417 PHKIDGRIVEP---KRAVPREEIKRPEASATVKK-----------------LFVAGLKQD 536
K++ I+E K +V R + K+ E SA +K+ L+V +++D
Sbjct: 295 VEKLNDSILEGTDCKLSVCRAQ-KKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEED 353
Query: 537 IEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+ ++ LR++FS+FG I S V+ D E G+ +GFGFV F+
Sbjct: 354 LNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFE 391
Score = 65.7 bits (153), Expect = 3e-11
Identities = 45/149 (30%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+FI LD + S+ + + +G I+ V D + SKG+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTAIE-- 203
Query: 417 PHKIDGRIVEPKRAV-----PREEIKRPEASATVK--KLFVAGLKQDIEEEDLREYFSTF 575
K++G ++ K+ PR + + + +K +FV + +++E L FS F
Sbjct: 204 --KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKF 261
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEFDDYD 662
G I S V+TD + GK +GFGFV F D D
Sbjct: 262 GEITSAVVMTDAQ-GKPKGFGFVAFADQD 289
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
L++ ++ D L++ + +G I VM D + RSKGFGF+ + + A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 417 PHKIDGRIVEPKRAVPREEIKRPE-ASATVKKL 512
K+ G R+E +R + AS +++L
Sbjct: 404 NSKMIGAKPLYVALAQRKEDRRAQLASQYMQRL 436
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 66.1 bits (154), Expect = 2e-11
Identities = 28/68 (41%), Positives = 45/68 (66%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
K+F+GGL Y T+D +L E++EQ+G+I + VV+ D T++S+G+GF+T + A +
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 414 RPHKIDGR 437
IDGR
Sbjct: 96 PNPIIDGR 103
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/58 (43%), Positives = 33/58 (56%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
K+FV GL ++ L EYF FG+I V+TD+ T K RG+GFV D +R C
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERAC 93
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 64.9 bits (151), Expect = 5e-11
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN- 410
KLF+G + + L+ +EQ+G+I + ++KD T KG F+TY Q
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 411 -NRPHKIDG--RIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGN 581
+ + G R ++ K A P+ KKLF+ L + E+++R F+TFG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 582 IVSVSVVTDKETGKKRGFGFVEF 650
+ V+V+ + G +G FV++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKY 171
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
KLFV + +++EE+DLR F FG I +++ DK TG +G F+ + D R
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
LF+ L Q+ + +L + F+ FG+IVS V D+ T + + FGFV +D+
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHT---RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTK 347
+ +KP+++ P+ +KLFIG L + ++ ++ + +GE+ +V V++
Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADG 161
Query: 348 RSKGFGFITYS---QAHMVDEA 404
SKG F+ Y AHM A
Sbjct: 162 ASKGCAFVKYKHGLDAHMAISA 183
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 64.9 bits (151), Expect = 5e-11
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN- 410
KLF+G + + L+ +EQ+G+I + ++KD T KG F+TY Q
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVRCQAT 89
Query: 411 -NRPHKIDG--RIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGN 581
+ + G R ++ K A P+ KKLF+ L + E+++R F+TFG
Sbjct: 90 LHDQKTLPGMNRAMQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGE 149
Query: 582 IVSVSVVTDKETGKKRGFGFVEF 650
+ V+V+ + G +G FV++
Sbjct: 150 LDEVTVLRGAD-GASKGCAFVKY 171
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
KLFV + +++EE+DLR F FG I +++ DK TG +G F+ + D R
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAVR 85
Score = 44.4 bits (100), Expect = 8e-05
Identities = 19/49 (38%), Positives = 31/49 (63%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
LF+ L Q+ + +L + F+ FG+IVS V D+ T + + FGFV +D+
Sbjct: 431 LFIYHLPQEFGDAELIQMFAPFGHIVSAKVFVDRATNQSKCFGFVSYDN 479
Score = 33.9 bits (74), Expect = 0.11
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHT---RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTK 347
+ +KP+++ P+ +KLFIG L + ++ ++ + +GE+ +V V++
Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADG 161
Query: 348 RSKGFGFITYS---QAHMVDEA 404
SKG F+ Y AHM A
Sbjct: 162 ASKGCAFVKYKHGLDAHMAISA 183
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
E L I L T ++ + GEI +++D T +S G+GF+ Y +
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALR 98
Query: 402 AQNN-RPHKIDGRIVEPKRAVP-REEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTF 575
A ++ ++ + ++ A P ++IK L+V+G+ + + +L F F
Sbjct: 99 AVSSFNGLRLQNKTIKVSYARPSNDQIKG-------SNLYVSGIPKSMTLHELESIFRPF 151
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 671
G I++ +++D TG +G GFV FD D D
Sbjct: 152 GQIITSRILSDNVTGLSKGVGFVRFDKKDEAD 183
Score = 36.3 bits (80), Expect = 0.021
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 380
LF+ L T D+ L + + Q+G IV+V +++D T++ KG+ F++ S
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMS 422
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
L++ G+ T L+ + +G+I+ ++ D T SKG GF+ + + D A
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/162 (24%), Positives = 70/162 (43%)
Frame = +3
Query: 201 GDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 380
G+ +EP R L++G LD T+ + + Q G + V+ D F +
Sbjct: 39 GNGSDEP---RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHG 95
Query: 381 QAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLRE 560
QA + N R +D + P ++ + + + +FV L +++ + LRE
Sbjct: 96 QASQALQTMNKRL-LLDREMKVNWAVEPGQQQSKIDTTRHFH-VFVGDLSSEVDNQKLRE 153
Query: 561 YFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
F FG++ V+ D T K +G+GFV + + +R Q
Sbjct: 154 AFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQ 195
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 59.7 bits (138), Expect = 2e-09
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+ +FV + D+ E+ +R FS GN++S+ +V D+ETGK +G+GF+EF D
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPD 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-Q 407
R +F+G + Y ++ +++ + + G ++ + ++ D +T + KG+GFI + + A +
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Query: 408 NNRPHKIDGRIV 443
N +++ GRI+
Sbjct: 78 NLNGYELSGRIL 89
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 59.3 bits (137), Expect = 3e-09
Identities = 42/155 (27%), Positives = 67/155 (43%), Gaps = 4/155 (2%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
E R LF+ LD TD L + Q G ++ ++ + F ++QA + +
Sbjct: 37 EDPRTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDPYAFVEFSDHNQATLALQ 96
Query: 402 AQNNRPHKIDGRIV----EPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFS 569
+ N R V EP+ P E +PE S +FV L +I+ LRE F
Sbjct: 97 SHNGRELLEKEMHVTWAFEPRE--PGENRSKPETSRHFH-VFVGDLCSEIDSTKLREAFV 153
Query: 570 TFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
FG + ++ D T K +G+GFV + + +R
Sbjct: 154 KFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAER 188
Score = 50.0 bits (114), Expect = 2e-06
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Frame = +3
Query: 186 KPSESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKG 359
+P E G++ +PE +R +F+G L + L+E + ++GE+ + +++D T + KG
Sbjct: 115 EPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKG 174
Query: 360 FGFITYSQAHMVDEA 404
+GF++Y + + A
Sbjct: 175 YGFVSYPRREDAERA 189
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 58.4 bits (135), Expect = 4e-09
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+FI LD + S+ + + +G I+ V D + SKG+GF+ + +EA N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 176
Query: 417 PHKIDGRIVEPKRAV-----PREEIKRP--EASATVKKLFVAGLKQDIEEEDLREYFSTF 575
K++G ++ K+ PR + R E + ++V +E L + F+ F
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKF 236
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEF 650
GNI S V+T + GK +GFGFV F
Sbjct: 237 GNITSCEVMTVE--GKSKGFGFVAF 259
Score = 54.4 bits (125), Expect = 7e-08
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Frame = +3
Query: 276 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE-- 446
+L++ + ++G I VM +SKGFGF+ ++ + A Q I+G ++
Sbjct: 228 TLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLH 285
Query: 447 ----PKRAVPREEIKRPEASATVKK--------LFVAGLKQDIEEEDLREYFSTFGNIVS 590
K++ E+K+ ++ L+V L + ++++ L++ F ++GNI S
Sbjct: 286 VCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITS 345
Query: 591 VSVVTDKETGKKRGFGFVEFD 653
V+TD E G+ +GFGFV F+
Sbjct: 346 AKVMTD-ENGRSKGFGFVCFE 365
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 58.4 bits (135), Expect = 4e-09
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+FI LD + S+ + + +G I+ V D + SKG+GF+ + +EA N
Sbjct: 59 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 113
Query: 417 PHKIDGRIVEPKRAV-----PREEIKRP--EASATVKKLFVAGLKQDIEEEDLREYFSTF 575
K++G ++ K+ PR + R E + ++V +E L + F+ F
Sbjct: 114 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 173
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEF 650
GNI S V+T + GK +GFGFV F
Sbjct: 174 GNITSCEVMTVE--GKSKGFGFVAF 196
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Frame = +3
Query: 276 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE-- 446
+L++ + ++G I VM +SKGFGF+ ++ + A Q I+G ++
Sbjct: 165 TLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLH 222
Query: 447 ----PKRAVPREEIKRPEASATVKK--------LFVAGLKQDIEEEDLREYFSTFGNIVS 590
K++ E+K+ ++ L+V L + ++++ L++ F ++GNI S
Sbjct: 223 VCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITS 282
Query: 591 VSVVTDKETGKKRGFGFVEFD 653
V+TD E G+ +GFGFV F+
Sbjct: 283 AKVMTD-ENGRSKGFGFVCFE 302
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 58.4 bits (135), Expect = 4e-09
Identities = 43/145 (29%), Positives = 70/145 (48%), Gaps = 7/145 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+FI LD + S+ + + +G I+ V D + SKG+GF+ + +EA N
Sbjct: 122 IFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFE----TEEAAQNA 176
Query: 417 PHKIDGRIVEPKRAV-----PREEIKRP--EASATVKKLFVAGLKQDIEEEDLREYFSTF 575
K++G ++ K+ PR + R E + ++V +E L + F+ F
Sbjct: 177 IQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKF 236
Query: 576 GNIVSVSVVTDKETGKKRGFGFVEF 650
GNI S V+T + GK +GFGFV F
Sbjct: 237 GNITSCEVMTVE--GKSKGFGFVAF 259
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Frame = +3
Query: 276 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE-- 446
+L++ + ++G I VM +SKGFGF+ ++ + A Q I+G ++
Sbjct: 228 TLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLH 285
Query: 447 ----PKRAVPREEIKRPEASATVKK--------LFVAGLKQDIEEEDLREYFSTFGNIVS 590
K++ E+K+ ++ L+V L + ++++ L++ F ++GNI S
Sbjct: 286 VCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITS 345
Query: 591 VSVVTDKETGKKRGFGFVEFD 653
V+TD E G+ +GFGFV F+
Sbjct: 346 AKVMTD-ENGRSKGFGFVCFE 365
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical protein
T23F6.4 protein.
Length = 872
Score = 56.8 bits (131), Expect = 1e-08
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 20/183 (10%)
Frame = +3
Query: 186 KPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLK-EFYEQWGEIVDVVVMK------DPKT 344
K S +E E LF+ L + TTD SL+ F +++G++V + +P
Sbjct: 626 KKSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTK 685
Query: 345 KRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE---------PKRAVPREEIKRPEAS 494
S GFGF+ + A A ++ + +DG +E K A+ R+E+K+ E
Sbjct: 686 PLSMGFGFVQFYTAFDAKTALKDMQGELLDGHSLELKISHRENADKGALKRKEVKQKE-Q 744
Query: 495 ATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKK---RGFGFVEFDDYDP 665
KL V L + +++ F TFG + ++ + K+ G+K RGFGFV+F D
Sbjct: 745 GECTKLLVRNLPFEASVKEVETLFETFGAVKTIRI--PKKPGQKQQHRGFGFVDFISADE 802
Query: 666 VDR 674
R
Sbjct: 803 AHR 805
Score = 44.8 bits (101), Expect = 6e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +3
Query: 465 REEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFV 644
+EE E +LF+ L +E+DL+ F +G + V VV DK+TG +GF V
Sbjct: 266 KEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIV 325
Query: 645 EF 650
EF
Sbjct: 326 EF 327
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +3
Query: 177 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSK 356
L + E E+ T +LF+ L Y T + L+ ++++GE+ +V V+ D KT K
Sbjct: 261 LESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACK 320
Query: 357 GFGFITY 377
GF + +
Sbjct: 321 GFAIVEF 327
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
T +L + L T+ L++F+E++G+I D +K K + +GF F+ +
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISD-ASLKYTKEGKFRGFAFVGF 50
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 56.8 bits (131), Expect = 1e-08
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+ L+V G +D+ E+ L F FG++V++S+ D E+GK RGFGFVEFD
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Score = 38.3 bits (85), Expect = 0.005
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Frame = +3
Query: 225 HTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 398
H RK L++GG T+ L + +G++V + + D ++ + +GFGF+ + A
Sbjct: 7 HNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAA 66
Query: 399 EA-QNNRPHKIDGRIVEPKRAVPREEIKRPE 488
A N ++ G+ + A P + +R +
Sbjct: 67 MAIDNMNESELFGKTIRVNFARPPKATERSQ 97
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Frame = +3
Query: 195 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
E G + + TR +F+G L + L+E ++ +G++ D V++D T +SKG+GF
Sbjct: 8 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 67
Query: 369 ITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPRE-EIKRP-------------EASATV 503
++Y + + A + + R + A + + ++P + S
Sbjct: 68 VSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN 127
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
++V + + E+++R+ F++FG I V + K +G+ FV+FD+ D + +
Sbjct: 128 TSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 180
Query: 684 Q 686
Q
Sbjct: 181 Q 181
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Frame = +3
Query: 195 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
E G + + TR +F+G L + L+E ++ +G++ D V++D T +SKG+GF
Sbjct: 18 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 77
Query: 369 ITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPRE-EIKRP-------------EASATV 503
++Y + + A + + R + A + + ++P + S
Sbjct: 78 VSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN 137
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
++V + + E+++R+ F++FG I V + K +G+ FV+FD+ D + +
Sbjct: 138 TSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 190
Query: 684 Q 686
Q
Sbjct: 191 Q 191
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 56.4 bits (130), Expect = 2e-08
Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Frame = +3
Query: 195 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
E G + + TR +F+G L + L+E ++ +G++ D V++D T +SKG+GF
Sbjct: 89 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 148
Query: 369 ITYSQAHMVDEA-QNNRPHKIDGRIVEPKRAVPRE-EIKRP-------------EASATV 503
++Y + + A + + R + A + + ++P + S
Sbjct: 149 VSYPKREEAERAIEQMNGQWLGRRTIRTNWATRKPGDQEKPSHYNEKSYDEIYNQTSGDN 208
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCL 683
++V + + E+++R+ F++FG I V + K +G+ FV+FD+ D + +
Sbjct: 209 TSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDNKDAAAKAIV 261
Query: 684 Q 686
Q
Sbjct: 262 Q 262
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/145 (26%), Positives = 63/145 (43%)
Frame = +3
Query: 219 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 398
P + L+I GL T D L+E ++G I + D T KG+GF+ +
Sbjct: 77 PLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQAAA 136
Query: 399 EAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFG 578
A +DG E +A ++++ E T L++A L D E+ L + FG
Sbjct: 137 AA-------VDGLNTEGVQA-QMAKLQQQEQDPT--NLYIANLPLDFTEQMLETELNKFG 186
Query: 579 NIVSVSVVTDKETGKKRGFGFVEFD 653
++S ++ + + RG GF D
Sbjct: 187 MVISTRILRTPD-NQSRGVGFARMD 210
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 54.8 bits (126), Expect = 6e-08
Identities = 38/141 (26%), Positives = 72/141 (51%), Gaps = 15/141 (10%)
Frame = +3
Query: 276 SLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVE-- 446
+L++ + ++G I VM +SKGFGF+ ++ + A Q I+G ++
Sbjct: 168 TLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLH 225
Query: 447 ----PKRAVPREEIKRPEASATVKK--------LFVAGLKQDIEEEDLREYFSTFGNIVS 590
K++ E+K+ ++ L+V L + ++++ L++ F ++GNI S
Sbjct: 226 VCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITS 285
Query: 591 VSVVTDKETGKKRGFGFVEFD 653
V+TD E G+ +GFGFV F+
Sbjct: 286 AKVMTD-ENGRSKGFGFVCFE 305
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +3
Query: 462 PREEIKRP--EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGF 635
PR + R E + ++V +E L + F+ FGNI S V+T + GK +GF
Sbjct: 137 PRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE--GKSKGF 194
Query: 636 GFVEF 650
GFV F
Sbjct: 195 GFVAF 199
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 54.4 bits (125), Expect = 7e-08
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
+F+G L ++ LK + ++GE+ + V++D +T++SKG+GF+++ + A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 417 PHKIDGRIVEPKRAVPREEIKRPEASATVKKLF-----------VAGLKQDIEEEDLREY 563
K G+ R+ + T +++F V + Q + DLR+
Sbjct: 197 NGKWIGKRAVRTNWAARKNSEENRDKLTFEQVFNSTKADNTSVYVGNISQQTTDADLRDL 256
Query: 564 FSTFGNIVSVSV 599
FST+G+I V +
Sbjct: 257 FSTYGDIAEVRI 268
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
+FV L +D+ E L+ F+ FG + V+ D +T K +G+GFV F
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/56 (25%), Positives = 32/56 (57%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
+++G + +TTD+ L++ + +G+I +V + KT+R + F+ Y + +A
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIF---KTQR---YAFVRYEKKECATKA 288
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS---QAHMVDEA 404
++++G + + + L+ ++ +G I + + DP T K F F+ Y A + E+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 405 QNN-----RPHKIDGRIVEPKRAVPREEIKRPEASATVK------KLFVAGLKQDIEEED 551
N R K++ + + R +P K +++V+ + D+ E D
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 552 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 486 EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+A + + +++V + +I E+ LR F FG I S+++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS---QAHMVDEA 404
++++G + + + L+ ++ +G I + + DP T K F F+ Y A + E+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 405 QNN-----RPHKIDGRIVEPKRAVPREEIKRPEASATVK------KLFVAGLKQDIEEED 551
N R K++ + + R +P K +++V+ + D+ E D
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 552 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 486 EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+A + + +++V + +I E+ LR F FG I S+++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 54.4 bits (125), Expect = 7e-08
Identities = 35/155 (22%), Positives = 68/155 (43%), Gaps = 14/155 (9%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS---QAHMVDEA 404
++++G + + + L+ ++ +G I + + DP T K F F+ Y A + E+
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQES 162
Query: 405 QNN-----RPHKIDGRIVEPKRAVPREEIKRPEASATVK------KLFVAGLKQDIEEED 551
N R K++ + + R +P K +++V+ + D+ E D
Sbjct: 163 MNGQMLGGRNLKVNSMMFQEMRLPQNMPQAQPIIDMVQKDAKKYFRVYVSSVHPDLSETD 222
Query: 552 LREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
L+ F FG IV + RGFG++EF++
Sbjct: 223 LKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNN 257
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/56 (32%), Positives = 33/56 (58%)
Frame = +3
Query: 486 EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+A + + +++V + +I E+ LR F FG I S+++ D TG + F FVE++
Sbjct: 96 QALSIMSRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYE 151
Score = 33.1 bits (72), Expect = 0.19
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 54.0 bits (124), Expect = 1e-07
Identities = 37/152 (24%), Positives = 65/152 (42%)
Frame = +3
Query: 198 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
+ ++ + L+I GL T D L+E ++G I + D T KG+GF+ +
Sbjct: 96 ASSNFNTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 155
Query: 378 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLR 557
A +DG E +A ++++ E T L++A L D E+ L
Sbjct: 156 ESPQAAAAA-------VDGLNTEGVQA-QMAKLQQQEQDPT--NLYIANLPLDFTEQMLE 205
Query: 558 EYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+ FG ++S ++ + + RG GF D
Sbjct: 206 TELNKFGMVISTRILRTPD-NQSRGVGFARMD 236
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 53.6 bits (123), Expect = 1e-07
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
E R +F+ LD+ TT+ +++ E I K +GF ++ +
Sbjct: 590 EDARTIFVSNLDFTTTEDEIRQAIEGVASIR--FARKANSDLVHRGFAYVVMENDQKAQQ 647
Query: 402 AQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVK-KLFVAGLKQDIEEEDLREYFSTFG 578
A + GR + P + + ++ K K+FV + +++L+ FS FG
Sbjct: 648 ALLKDRVPVKGRPMFISANDPEKRVGFKFSTTLEKSKVFVRNVHFQATDDELKALFSKFG 707
Query: 579 NIVSVSVVTDKETGKKRGFGFVEFD 653
+ SV VT K+ GK +G FV+FD
Sbjct: 708 TVTSVRRVTHKD-GKPKGIAFVDFD 731
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 51.2 bits (117), Expect = 7e-07
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
++V E+DL YFS GN+ +V +V D+ETG+ RGF FVEF +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
Score = 39.1 bits (87), Expect = 0.003
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
+++G ++TT+ L ++ Q G + +V ++ D +T R +GF F+ +++
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
L I L Y+TT + L+ +E++G+I DV + +D +++SKGFGF+ + + + A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 417 PHK-IDGR 437
K +DGR
Sbjct: 81 DGKLVDGR 88
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
L + L DLR F +G+I V + DK + + +GFGFV F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 416
L I L Y+TT + L+ +E++G+I DV + +D +++SKGFGF+ + + + A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 417 PHK-IDGR 437
K +DGR
Sbjct: 81 DGKLVDGR 88
Score = 35.9 bits (79), Expect = 0.027
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
L + L DLR F +G+I V + DK + + +GFGFV F
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++++G + + +L +E+ G+I D+ +M DP + S+G+ F+TY + D A
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY--CNKEDAAAAA 258
Query: 414 RPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFG-NIVS 590
+ + DG + + + + S +LF+ + + ++++ E T +V
Sbjct: 259 KTY--DGHEISTGKPL------KVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVD 310
Query: 591 VSV--VTDKETGKKRGFGFVEFDDY 659
V V V D E K RGF FV+F D+
Sbjct: 311 VIVYSVPDNEKIKNRGFCFVDFIDH 335
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 48.4 bits (110), Expect = 5e-06
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
++V EE+L +FS+ G I +V +V D+ETG+ RGF F+EF + R Q
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Score = 39.5 bits (88), Expect = 0.002
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
+++G ++TT+ L F+ G+I +V ++ D +T R +GF FI +++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAE 55
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 48.4 bits (110), Expect = 5e-06
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 174 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRS 353
I P+E+ E+P T LF+G ++Y T++S L+ +E +G+I + ++ D + +
Sbjct: 87 IATWNPAENPRASEDPYRT--LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKP 143
Query: 354 KGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRAVPREEIKRPEASATVKKL 512
+G+ FI YS D+A+ + + K DG V+ KR V E R + + ++L
Sbjct: 144 RGYAFIEYS-----DKAEMHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRL 192
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +3
Query: 477 KRPEASAT-VKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
+ P AS + LFV + + E LR F +G I +++V D E GK RG+ F+E+
Sbjct: 94 ENPRASEDPYRTLFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKPRGYAFIEYS 152
Query: 654 D 656
D
Sbjct: 153 D 153
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 48.4 bits (110), Expect = 5e-06
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 11/168 (6%)
Frame = +3
Query: 216 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 395
E R L I + T L+EF+ G + DV ++ D +T RSKG ++ + V
Sbjct: 20 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Query: 396 DEAQNNRPHKIDGRIVEPKR-AVPREEIKRPEASATV----------KKLFVAGLKQDIE 542
++ G ++ +R R ++T+ + V L I+
Sbjct: 80 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 139
Query: 543 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
E+ +R+ F +FG I + + D + RGF + F + D + C Q
Sbjct: 140 EKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQ 186
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = +3
Query: 447 PKRAVPRE-EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGK 623
P+ + P+ +++ + L + + +D DL E+FS G + V ++TD TG+
Sbjct: 5 PRHSPPKNAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGR 64
Query: 624 KRGFGFVEFDDYDPV 668
+G +VEF D + V
Sbjct: 65 SKGICYVEFWDEESV 79
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 48.4 bits (110), Expect = 5e-06
Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 11/168 (6%)
Frame = +3
Query: 216 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 395
E R L I + T L+EF+ G + DV ++ D +T RSKG ++ + V
Sbjct: 165 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Query: 396 DEAQNNRPHKIDGRIVEPKR-AVPREEIKRPEASATV----------KKLFVAGLKQDIE 542
++ G ++ +R R ++T+ + V L I+
Sbjct: 225 PLGLALNGQRLMGAPLQIQRTCAERNRAANSSVASTLGFVAPGNKGPTHVLVENLHPKID 284
Query: 543 EEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVCLQ 686
E+ +R+ F +FG I + + D + RGF + F + D + C Q
Sbjct: 285 EKMIRDIFESFGRIEKIDLEVDSNR-ENRGFATITFRNADDAQKSCEQ 331
Score = 47.6 bits (108), Expect = 8e-06
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 417 PHKIDGRIVEPKRAVPRE-EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSV 593
P + D P+ + P+ +++ + L + + +D DL E+FS G + V
Sbjct: 140 PERRDVMPFNPRHSPPKNAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDV 199
Query: 594 SVVTDKETGKKRGFGFVEFDDYDPV 668
++TD TG+ +G +VEF D + V
Sbjct: 200 RIITDSRTGRSKGICYVEFWDEESV 224
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/49 (38%), Positives = 32/49 (65%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
++V + EE++ YF+ G++ +V +V D+ETG+ RGF FVEF +
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
Score = 36.3 bits (80), Expect = 0.021
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQ 383
+++G + Y+ T+ + ++ G + +V ++ D +T R +GF F+ +S+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +3
Query: 219 PEHT-RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMV 395
P++T + +++ + + T S L+ +++++G I V + DP T +GF IT+
Sbjct: 20 PKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGA 79
Query: 396 DEAQNNRPHKIDGRIVEPKRAVP 464
++A RPH IDG V+ + +P
Sbjct: 80 NKAIEQRPHVIDGDRVDVEPYIP 102
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/64 (29%), Positives = 34/64 (53%)
Frame = +3
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 677
T + +++ +K + L YF +G+I SV++ D +TG RGF + FD D ++
Sbjct: 23 TGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKA 82
Query: 678 CLQQ 689
Q+
Sbjct: 83 IEQR 86
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/68 (30%), Positives = 41/68 (60%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++F+GG TT++ L+E +E++ + DV ++K +SKG+GFIT+ +E +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKL 125
Query: 414 RPHKIDGR 437
P +++ R
Sbjct: 126 TPKQLEFR 133
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 677
++FV G E +LRE+F F + V +V + G+ +G+GF+ F+ D + +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 122
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 46.8 bits (106), Expect = 1e-05
Identities = 16/49 (32%), Positives = 33/49 (67%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+++ GL + E D+ FS +G +++++++ DK+TGK +GF F+ + D
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKD 88
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++IGGL Y ++ + + Q+GE++++ +++D T +SKGF F+ Y A +N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/68 (30%), Positives = 41/68 (60%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++F+GG TT++ L+E +E++ + DV ++K +SKG+GFIT+ +E +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKL 126
Query: 414 RPHKIDGR 437
P +++ R
Sbjct: 127 TPKQLEFR 134
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 677
++FV G E +LRE+F F + V +V + G+ +G+GF+ F+ D + +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLD-GQSKGYGFITFETEDQAEEI 123
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 219 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 398
P+ ++L + + +R D LK +E++G + DV ++ + + SKGFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 399 EA-QNNRPHKIDGRIVEPKRAVPREEIKR 482
A Q I+GR +E A R K+
Sbjct: 207 RARQELHGSMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.0 bits (104), Expect = 3e-05
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 219 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVD 398
P+ ++L + + +R D LK +E++G + DV ++ + + SKGFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 399 EA-QNNRPHKIDGRIVEPKRAVPREEIKR 482
A Q I+GR +E A R K+
Sbjct: 207 RARQELHGSMIEGRKIEVNCATARVHSKK 235
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 45.2 bits (102), Expect = 4e-05
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
+ +FIG +D+ +T ++E ++ G+IV + KD TK+ K F +I + + ++ A
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/77 (28%), Positives = 40/77 (51%)
Frame = +3
Query: 441 VEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETG 620
+E VP E ++ A K +F+ + + E++ E+F G IV ++ DK T
Sbjct: 36 LESAAYVPPTEEEQKAIDA--KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTK 93
Query: 621 KKRGFGFVEFDDYDPVD 671
K++ F ++EFDD ++
Sbjct: 94 KQKNFAYIEFDDSSSIE 110
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/118 (22%), Positives = 57/118 (48%)
Frame = +3
Query: 318 VVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASA 497
V+ + + S F +++ ++++ QN ++ P P EE ++ +
Sbjct: 6 VIADNNCNEESSNSFEMEIEAESAILEQIQNKMAKNLESAAYVP----PTEEEQK---AI 58
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 671
K +F+ + + E++ E+F G+IV ++ DK T K++ F ++EFDD ++
Sbjct: 59 DAKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIE 116
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEA 404
+ +FIG +D+ +T ++E ++ G IV + KD TK+ K F +I + + ++ A
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 1/103 (0%)
Frame = +3
Query: 345 KRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAG 524
K+S ++ + V++A K+D ++ V + K+ E + +FV
Sbjct: 198 KQSSLTFYVKFGAEESVEKALKYNGTKLDDHVIR----VDKVGSKKKEFGKDMA-IFVGN 252
Query: 525 LKQDIEEEDLREYFST-FGNIVSVSVVTDKETGKKRGFGFVEF 650
L +I E+ L +FS G + +V +V DK+TGK +GF FV F
Sbjct: 253 LPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNF 295
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 480 RPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY 659
R AS T +++V+ + E+DL F +G ++SV +VT+ + G K GFGFV D
Sbjct: 43 REPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSI 100
Query: 660 DPVDR 674
+ ++
Sbjct: 101 ESCEK 105
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++++ + + + L + +G ++ V ++ + + SKGFGF+T ++A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAA 109
Query: 414 -RPHKIDGRIVEPKRAVP--REEIKRPE 488
+ GRI+E +RA P R+ I P+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLINNPQ 137
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +3
Query: 480 RPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY 659
R AS T +++V+ + E+DL F +G ++SV +VT+ + G K GFGFV D
Sbjct: 43 REPASFTDNRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTN-DRGSK-GFGFVTLDSI 100
Query: 660 DPVDR 674
+ ++
Sbjct: 101 ESCEK 105
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/88 (23%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
++++ + + + L + +G ++ V ++ + + SKGFGF+T ++A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAA 109
Query: 414 -RPHKIDGRIVEPKRAVP--REEIKRPE 488
+ GRI+E +RA P R+ I P+
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLINNPQ 137
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
K L V L E+DLR+ F FG I +V D+ +G RGFGF+ F+
Sbjct: 76 KCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
Score = 38.3 bits (85), Expect = 0.005
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS 380
D E P+ ++ L + L TT+ L++ + ++GEI ++ D + S+GFGFI ++
Sbjct: 68 DRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FGFV +
Sbjct: 328 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSY 383
Query: 651 DD 656
++
Sbjct: 384 EN 385
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/140 (27%), Positives = 61/140 (43%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+LF+G L ++ LKE + G+I + + KGF F+ + A+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK-- 167
Query: 414 RPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSV 593
IDGRI+ ++ R + A+ VK+ L + E L FS FG++
Sbjct: 168 --EAIDGRIIHGRQVRVRFAVH--GAAIRVKE-----LSPTVSNEMLYHAFSHFGDVERA 218
Query: 594 SVVTDKETGKKRGFGFVEFD 653
+ D E G+ G G VEF+
Sbjct: 219 VHIVD-EKGRPTGEGIVEFE 237
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 42.7 bits (96), Expect = 2e-04
Identities = 38/140 (27%), Positives = 61/140 (43%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+LF+G L ++ LKE + G+I + + KGF F+ + A+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK-- 167
Query: 414 RPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSV 593
IDGRI+ ++ R + A+ VK+ L + E L FS FG++
Sbjct: 168 --EAIDGRIIHGRQVRVRFAVH--GAAIRVKE-----LSPTVSNEMLYHAFSHFGDVERA 218
Query: 594 SVVTDKETGKKRGFGFVEFD 653
+ D E G+ G G VEF+
Sbjct: 219 VHIVD-EKGRPTGEGIVEFE 237
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P++ + R+L + + ++ + L +E+ G +VDV ++ + + SKGFGF
Sbjct: 86 PNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGF 143
Query: 369 ITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIKRPEASATV 503
+T D A+ I+GR VE A R K+ + +V
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSV 189
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
++L V+ + E DL F G +V V ++ + E G K GFGFV + D DR
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 154
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Frame = +3
Query: 189 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGF 368
P++ + R+L + + ++ + L +E+ G +VDV ++ + + SKGFGF
Sbjct: 86 PNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGF 143
Query: 369 ITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIKRPEASATV 503
+T D A+ I+GR VE A R K+ + +V
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKKAKPLMSV 189
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
++L V+ + E DL F G +V V ++ + E G K GFGFV + D DR
Sbjct: 100 RRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 154
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = +3
Query: 501 VKKLFVAGLKQ---DIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+KK++V +K+ E++L YF FGN++ + V ++ TG +G+ +V FD+
Sbjct: 28 LKKIYVVKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDN 82
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
LFV L +EDL FS FG I + +V D+ +G + F+EFD+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 174 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRS 353
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 224 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 281
Query: 354 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 455
+ FI + A ++A K+D +++ +R
Sbjct: 282 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 311
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
LFV L +EDL FS FG I + +V D+ +G + F+EFD+
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 174 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRS 353
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 224 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 281
Query: 354 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 455
+ FI + A ++A K+D +++ +R
Sbjct: 282 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 311
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
LFV L +EDL FS FG I + +V D+ +G + F+EFD+
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
Score = 33.9 bits (74), Expect = 0.11
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +3
Query: 174 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRS 353
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 155 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 212
Query: 354 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 455
+ FI + A ++A K+D +++ +R
Sbjct: 213 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 242
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/76 (28%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +3
Query: 450 KRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDK-ETGKK 626
+RA PR AS K++ + L +++ + L E FS +G I +V + D+
Sbjct: 116 RRASPRRSPAARSASPA-KRVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVH 174
Query: 627 RGFGFVEFDDYDPVDR 674
RG+G+VE+D+ + ++
Sbjct: 175 RGYGYVEYDNLEDAEK 190
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +3
Query: 483 PEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFD 653
P+ S +FV + ++ E+D+ + FS +G I ++ + D+ TG +G+ VE++
Sbjct: 48 PQRSVEGWIVFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYE 104
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/57 (26%), Positives = 32/57 (56%)
Frame = +3
Query: 486 EASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+A A K ++V + E++ ++F G++ V++ D+ +G +GF +VEF +
Sbjct: 72 KAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTE 128
Score = 35.1 bits (77), Expect = 0.048
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 410
+ +++G +DY T +++ + G + V + D + KGF ++ +++ + A
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 411 NRPHKIDGR--IVEPKR 455
+ GR V+PKR
Sbjct: 138 MTDSLLRGRQIKVDPKR 154
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 38.3 bits (85), Expect = 0.005
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Frame = +3
Query: 231 RKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKD----------PKTKRSKGFGFITYS 380
RK+ + + + T S L+ F+ Q+G+I ++ ++ PK R+ G IT+
Sbjct: 112 RKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFK 171
Query: 381 QAHMVDEAQNNRPHKI 428
++ D A+N P ++
Sbjct: 172 KSEHADRAKNANPEEL 187
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 483 PEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY- 659
P + +K++V L D+ E+++ + F +G I V + ++G+ F FVEF+D+
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHR 57
Query: 660 DPVDRV 677
D D V
Sbjct: 58 DAEDAV 63
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 38.3 bits (85), Expect = 0.005
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 483 PEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDY- 659
P + +K++V L D+ E+++ + F +G I V + ++G+ F FVEF+D+
Sbjct: 2 PRGGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHR 57
Query: 660 DPVDRV 677
D D V
Sbjct: 58 DAEDAV 63
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
K++V GL D ++L E F FG I V V + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
K++V GL D ++L E F FG I V V + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/50 (40%), Positives = 26/50 (52%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
K++V GL D ++L E F FG I V V + GF FVE+DD
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDD 48
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 513 FVAGLKQDIEEEDLREYFS-TFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 662
F+ G+ + ++ +L +F T+G++V V + D + RG G V F DYD
Sbjct: 289 FIGGVPRPLKAVELAHFFEQTYGHVVCVGIDIDNKFKYPRGSGRVAFSDYD 339
Score = 29.1 bits (62), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNI 584
+K+FV GL ++E D+ +FS +G +
Sbjct: 88 RKVFVGGLPSCVKESDILNFFSRYGRL 114
Score = 27.9 bits (59), Expect = 7.2
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +3
Query: 219 PE-HTRKLFIGGLDYRTTDSSLKEFYEQWGEI 311
PE ++RK+F+GGL +S + F+ ++G +
Sbjct: 83 PEVYSRKVFVGGLPSCVKESDILNFFSRYGRL 114
>U80455-3|AAO38606.1| 145|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform c protein.
Length = 145
Score = 36.7 bits (81), Expect = 0.016
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFG 638
++K P+ + LF+ L QD + DL F+ FG I+S V DK T + FG
Sbjct: 69 DVKGPDGA----NLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFG 120
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.016
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPV 668
+ ++V + ++ E+F+ G + V++ DK TG ++ F FVEF + V
Sbjct: 46 RSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLESV 100
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 36.3 bits (80), Expect = 0.021
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 237 LFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYS----QAHMVDEA 404
+F+ L Y T + +KE ++G+I ++ K + SKG F+ +S ++ ++
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 405 QNNRPHKIDGRIVEPKRAVPREEIKRPEASATVK 506
++ ID R+V+ A+PR+E E K
Sbjct: 325 EDG--VIIDNRLVKANLAIPRKEAADMEKEKLTK 356
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+ K+F+ GL + E+ ++E +FG + + S+ D + G +G+ F E+ D
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 346
Query: 402 A 404
A
Sbjct: 347 A 347
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+ K+F+ GL + E+ ++E +FG + + S+ D + G +G+ F E+ D
Sbjct: 289 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 340
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 346
Query: 402 A 404
A
Sbjct: 347 A 347
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+ K+F+ GL + E+ ++E +FG + + S+ D + G +G+ F E+ D
Sbjct: 264 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 315
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 321
Query: 402 A 404
A
Sbjct: 322 A 322
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 36.3 bits (80), Expect = 0.021
Identities = 15/53 (28%), Positives = 30/53 (56%)
Frame = +3
Query: 498 TVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
+ K+F+ GL + E+ ++E +FG + + S+ D + G +G+ F E+ D
Sbjct: 267 SANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLD 318
Score = 32.3 bits (70), Expect = 0.34
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +3
Query: 222 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDE 401
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 324
Query: 402 A 404
A
Sbjct: 325 A 325
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.5 bits (78), Expect = 0.036
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWG 305
DY P +RK+F+GG+ + T+++LK+ + ++G
Sbjct: 287 DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
Score = 27.5 bits (58), Expect = 9.6
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGN 581
+K+FV G+ DI E L++ F FG+
Sbjct: 295 RKIFVGGVPWDITEAALKDSFGEFGS 320
>Z69384-5|CAA93419.2| 408|Caenorhabditis elegans Hypothetical
protein T11G6.8 protein.
Length = 408
Score = 35.1 bits (77), Expect = 0.048
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Frame = +3
Query: 483 PEASATVKKLFVAGL----KQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
P A T+ L++ L Q + E+DL ++F +G+I + V+T+K G F+EF
Sbjct: 228 PPADTTITTLYIGNLGPSGAQQVTEKDLNDFFYQYGDIRCLRVLTEK------GCAFIEF 281
Query: 651 DDYDPVDR 674
+ +R
Sbjct: 282 TTREAAER 289
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.048
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +3
Query: 213 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
E E+ ++F G L +D L + + ++ V+++ +T +SKG+GF+++
Sbjct: 197 EWDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
++++ L + E+D+ +F +G I V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+++IG L R ++ ++ F+ +G+I DV++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 414 RPHKIDGRIVEPKRAV 461
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
++++ L + E+D+ +F +G I V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+++IG L R ++ ++ F+ +G+I DV++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 414 RPHKIDGRIVEPKRAV 461
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 34.7 bits (76), Expect = 0.063
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDD 656
++++ L + E+D+ +F +G I V + K GFGFVEFDD
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDD 45
Score = 31.1 bits (67), Expect = 0.78
Identities = 17/76 (22%), Positives = 39/76 (51%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+++IG L R ++ ++ F+ +G+I DV++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 414 RPHKIDGRIVEPKRAV 461
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 34.7 bits (76), Expect = 0.063
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 471 EIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
EIK + + ++VA ++++EE L E F G +V V + +++ K F VEF
Sbjct: 2 EIKPTPSPPEERTIYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAK--FALVEF 59
Query: 651 DD 656
+D
Sbjct: 60 ED 61
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 34.3 bits (75), Expect = 0.083
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 5/95 (5%)
Frame = +3
Query: 204 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYE-QWGEIVDVVVMKDPKTKRSKGFGFITYS 380
+D +H R +FIGG+ T L E +G++ V + DP+ K KG +T+S
Sbjct: 356 NDNSSVDHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFS 415
Query: 381 QAHMVDEAQNNR----PHKIDGRIVEPKRAVPREE 473
+ A + R H + + VE K V E+
Sbjct: 416 TSQAFVRAISGRFVQVNHAENNKRVEIKPYVMEEQ 450
Score = 32.3 bits (70), Expect = 0.34
Identities = 15/57 (26%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 423 KIDGRIVEPKRAVPREEIKRPEASATV--KKLFVAGLKQDIEEEDLREYFSTFGNIV 587
++DG ++ ++ KRP ++ + +K+F+ GL D+ EE + F FG ++
Sbjct: 216 RLDGSLMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 33.1 bits (72), Expect = 0.19
Identities = 22/84 (26%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +3
Query: 234 KLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 413
+++IG L R +D ++ F+ +G++ D V+MK+ GFGF+ + D+A
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSD-VIMKN-------GFGFVDFQDQRDADDA--- 51
Query: 414 RPHKIDGRIVEPKRAV---PREEI 476
H ++G+ + +R + PR ++
Sbjct: 52 -VHDLNGKELCGERVILEFPRRKV 74
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/55 (25%), Positives = 25/55 (45%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVD 671
++++ L + D+ +F +G + V + K GFGFV+F D D
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDAD 49
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 33.1 bits (72), Expect = 0.19
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +3
Query: 291 YEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 467
+E+ G +VDV ++ + + SKGFGF+T D A+ I+GR VE A R
Sbjct: 2 FEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 468 EEIKRPEASATV 503
K+ + +V
Sbjct: 60 VHNKKAKPLMSV 71
Score = 27.5 bits (58), Expect = 9.6
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +3
Query: 564 FSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDR 674
F G +V V ++ + E G K GFGFV + D DR
Sbjct: 2 FEKVGPVVDVEIIFN-ERGSK-GFGFVTMQNPDDADR 36
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 507 KLFVAGLKQDI-EEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
++F+ + + I +D+ E F FG I++V+ ++GFGFV+F++ D C
Sbjct: 84 RVFIGNIARAIITRDDIIELFRPFGKIIAVNYFA------QQGFGFVQFNEAGSADESC 136
>AF022982-4|AAB69938.1| 296|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 22 protein.
Length = 296
Score = 32.7 bits (71), Expect = 0.25
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 534 DIEEEDLREYFSTFGNIVSVSVVTDKETGKKR 629
D E+D+R+ FSTFG I +S +K+ +KR
Sbjct: 194 DYSEDDIRKLFSTFGIISHISSAIEKKDRRKR 225
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 31.5 bits (68), Expect = 0.59
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +3
Query: 327 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVK 506
+K+ K +R KG G + A A+ R + + ++ +R EE K EA+A VK
Sbjct: 227 LKEMKVER-KGKGPAKVTSAMAEKMAEEKRLKRRESKLKLKQRRA--EEKKGKEAAAQVK 283
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKR 629
K V + E + ++ +F N+ + DK+ GKK+
Sbjct: 284 KETVESTENGNEPVEKQKSGISFNNL-KFEIKEDKQRGKKQ 323
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 31.5 bits (68), Expect = 0.59
Identities = 28/101 (27%), Positives = 48/101 (47%)
Frame = +3
Query: 327 MKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVK 506
+K+ K +R KG G + A A+ R + + ++ +R EE K EA+A VK
Sbjct: 245 LKEMKVER-KGKGPAKVTSAMAEKMAEEKRLKRRESKLKLKQRRA--EEKKGKEAAAQVK 301
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKR 629
K V + E + ++ +F N+ + DK+ GKK+
Sbjct: 302 KETVESTENGNEPVEKQKSGISFNNL-KFEIKEDKQRGKKQ 341
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 180 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDV 320
NM S DY P + +FIGG+ +T + ++W +++++
Sbjct: 254 NMVNSNRYLDYASPTLPKTVFIGGMQVKTKKQGTPKLNKEWDDLLNI 300
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 30.7 bits (66), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 180 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDV 320
NM S DY P + +FIGG+ +T + ++W +++++
Sbjct: 254 NMVNSNRYLDYASPTLPKTVFIGGMQVKTKKQGTPKLNKEWDDLLNI 300
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 1804 ETARFKRSYVLMELVETEQDYVKDLTS 1830
>U80436-4|AAC71111.1| 552|Caenorhabditis elegans Uncoordinated
protein 73, isoform d protein.
Length = 552
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 98 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 157
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 158 ETARFKRSYVLMELVETEQDYVKDLTS 184
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 179 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 238
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 239 ETARFKRSYVLMELVETEQDYVKDLTS 265
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 184 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 243
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 244 ETARFKRSYVLMELVETEQDYVKDLTS 270
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 1804 ETARFKRSYVLMELVETEQDYVKDLTS 1830
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/87 (22%), Positives = 40/87 (45%)
Frame = +3
Query: 309 IVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRPE 488
++ +VV +D K + + + +DE N VEP+ A+P + K PE
Sbjct: 1744 VIPIVVAEDEKAEDCLPPPMENITINNSIDEKDMNEDSVAASDAVEPEVALPAKVEKTPE 1803
Query: 489 ASATVKKLFVAGLKQDIEEEDLREYFS 569
+A K+ +V + E++ +++ S
Sbjct: 1804 ETARFKRSYVLMELVETEQDYVKDLTS 1830
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEI-VDVVVMKDPKTKRSKGFGFITYSQAHMV 395
+ K+F+GG+ + + +F+ Q+G + VD V + P + R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNS-RGKSIAIGSYSYLFLV 259
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEI-VDVVVMKDPKTKRSKGFGFITYSQAHMV 395
+ K+F+GG+ + + +F+ Q+G + VD V + P + R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNS-RGKSIAIGSYSYLFLV 259
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +3
Query: 228 TRKLFIGGLDYRTTDSSLKEFYEQWGEI-VDVVVMKDPKTKRSKGFGFITYSQAHMV 395
+ K+F+GG+ + + +F+ Q+G + VD V + P + R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNS-RGKSIAIGSYSYLFLV 259
>Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 386
DY P + +F+GG+ T S ++W +++ + KT FG YS +
Sbjct: 260 DYASPTLPKTVFVGGMQVNTKKSGKSTLSKEWNDVLSL-----RKTNVLVSFGSNAYS-S 313
Query: 387 HMVDE 401
M DE
Sbjct: 314 DMPDE 318
>Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQA 386
DY P + +F+GG+ T S ++W +++ + KT FG YS +
Sbjct: 260 DYASPTLPKTVFVGGMQVNTKKSGKSTLSKEWNDVLSL-----RKTNVLVSFGSNAYS-S 313
Query: 387 HMVDE 401
M DE
Sbjct: 314 DMPDE 318
>Z74031-14|CAD66220.1| 187|Caenorhabditis elegans Hypothetical
protein F32D8.13 protein.
Length = 187
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 558 EYFSTFGNIVSVSVVTDKETGKKRGFGFVE 647
EYFS V++ + T +E K+RG+ FVE
Sbjct: 112 EYFSANYRTVTIRIETSEEDRKQRGYQFVE 141
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 29.9 bits (64), Expect = 1.8
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +3
Query: 243 IGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITY 377
+ L + L++ + + G ++ + + +D T KGF F+T+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>U00032-8|AAA50632.2| 1163|Caenorhabditis elegans Hypothetical
protein F37A4.4 protein.
Length = 1163
Score = 29.9 bits (64), Expect = 1.8
Identities = 23/108 (21%), Positives = 48/108 (44%)
Frame = +3
Query: 252 LDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKID 431
+DY T ++L F+E ++++ + T RS + S + ++Q + H +
Sbjct: 539 IDYSTLKANLDNFFELKKKMLETEKLVKGFTSRSARAASNSGSPVLKIKDSQKHADHLGN 598
Query: 432 GRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFSTF 575
G + K + +E +A+ +F A Q+I E++ +Y F
Sbjct: 599 GLLAIKKMIISLKE----KATILKSTMFNAKANQEIREKNPIDYIKEF 642
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDV 320
D+ P + + IGGL +T SLK E+W +I+D+
Sbjct: 255 DFPAPTFDKIIPIGGLSVKTDKKSLK-LEEKWSKILDI 291
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 207 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDV 320
D+ P + + IGGL +T SLK E+W +I+D+
Sbjct: 258 DFPAPTFDKIIPIGGLSVKTDKKSLK-LEEKWSKILDI 294
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Frame = +3
Query: 510 LFVAGLKQDIEEEDLREYFSTFGNIVS------VSVVTDKETGKKRGFGFVEFDD 656
+FV G+ E + + FST G+I + + TD+ TG+ +G + F D
Sbjct: 203 VFVQGISTTANEAYIADVFSTCGDIAKNDRGPRIKIYTDRNTGEPKGECMITFVD 257
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 180 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVDV 320
N+ S DY P + +F+GG+ T ++ K ++W I+++
Sbjct: 251 NLINSNQYIDYPSPALPKTVFVGGMQVNTNEAKTK-LSDEWNNILNI 296
>Z74041-7|CAA98518.2| 335|Caenorhabditis elegans Hypothetical
protein T03F7.4 protein.
Length = 335
Score = 29.1 bits (62), Expect = 3.1
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 620 SSFFICHNTNRNNISKCTKILSQVFFFNVLLQ 525
SSF++C +T +S+ TK L + +F +V +Q
Sbjct: 220 SSFYLCKSTTSLAVSERTKKLKRKYFLSVCIQ 251
>Z98853-7|CAB57906.1| 1675|Caenorhabditis elegans Hypothetical protein
C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 468 EEIKRPEASATVKKLFVAGLKQDIEEEDLREYF 566
E+I P + KL+ A +KQ+++EE +R+ F
Sbjct: 1131 EKISVPAIKTDIWKLYQARMKQNVKEECIRQRF 1163
>Z75530-10|CAA99796.2| 1675|Caenorhabditis elegans Hypothetical
protein C47E8.8 protein.
Length = 1675
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 468 EEIKRPEASATVKKLFVAGLKQDIEEEDLREYF 566
E+I P + KL+ A +KQ+++EE +R+ F
Sbjct: 1131 EKISVPAIKTDIWKLYQARMKQNVKEECIRQRF 1163
>U42844-4|ABM01868.1| 739|Caenorhabditis elegans Hypothetical
protein C08A9.3 protein.
Length = 739
Score = 28.3 bits (60), Expect = 5.5
Identities = 24/97 (24%), Positives = 47/97 (48%), Gaps = 3/97 (3%)
Frame = +3
Query: 369 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEI-KRPEASATVKKLFVAGLKQDIEE 545
+TY + +D +NN P+ +DG E V + + +P + K+ L +D +
Sbjct: 294 LTYLKYKWLDRRENNEPNILDGTDSEGNVLVDKIWLFDKPSMIVSHKEYQKLKLVKDSKY 353
Query: 546 EDLREYFSTFGNIV-SVSVVTDKE-TGKKRGFGFVEF 650
+ +F FG+I+ S++ + DK+ T F ++ F
Sbjct: 354 FNFL-FFQIFGSILPSLTTLFDKQKTSNNLNFCYLNF 389
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
+L++ + + E D+ + +G I ++S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
+L++ + + E D+ + +G I ++S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRVC 680
+L++ + + E D+ + +G I ++S+ K GF FV+F+D + C
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISM--------KYGFAFVDFEDSRDAEDAC 52
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 28.3 bits (60), Expect = 5.5
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 507 KLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEFDDYD 662
++++ GL D ++ + +FS SV + + ETG+ G EFD+Y+
Sbjct: 326 RVYMRGLPYDADDHAIAAFFSPL-RCHSVKIGIN-ETGRPSGDAIAEFDNYN 375
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 27.9 bits (59), Expect = 7.2
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 504 KKLFVAGLKQDIEEEDLREYFSTFGNIVSVSVVTDKETGKKRGFGFVEF 650
+++F+A L ++ + L E F G I + DKE GK +G +++
Sbjct: 188 ERIFIANLAFNVGTDKLYEVFGMAGKITWMDFRIDKE-GKSKGVCVIQY 235
>U50193-8|AAL11478.2| 394|Caenorhabditis elegans Hypothetical
protein ZK328.6 protein.
Length = 394
Score = 27.9 bits (59), Expect = 7.2
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 429 DGRIVEPKRAVPREEIKRPEASATVKKLFVAG 524
+G + +PK+ V ++ +K+ + A +KKL VAG
Sbjct: 323 EGVLPKPKKKVVKKVVKKKKPIAFIKKLEVAG 354
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 428 NFVRPIILSFINHMGLRICNKSKSF*SLGFWVFHY 324
NF P IL+ N+MG+RI + S LG ++ Y
Sbjct: 514 NFTNPDILTNGNNMGVRISDDSMYGVQLGLYIVGY 548
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 27.5 bits (58), Expect = 9.6
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Frame = +3
Query: 393 VDEAQNNRPHKIDGRIVEPKRAVPREE-IKRPEASATVKKLFVAGLKQDIEE----EDLR 557
+++ +++ +I + E K + +EE IKR E S +KK+ +Q++E+ EDL+
Sbjct: 272 MEKYKSSESERIQKLLEEQKAEILKEEEIKRKELSEQIKKIQELKDRQNVEKDREIEDLK 331
Query: 558 E 560
E
Sbjct: 332 E 332
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,366,634
Number of Sequences: 27780
Number of extensions: 281185
Number of successful extensions: 1211
Number of sequences better than 10.0: 140
Number of HSP's better than 10.0 without gapping: 985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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