Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6f04
         (694 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    25   0.78 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    22   5.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    22   5.5  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    22   5.5  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   9.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   9.6  

>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 24.6 bits (51), Expect = 0.78
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 157 PSSITLKYTKKTVLMLSHVLL 95
           PS   +KY K+ +LML  V+L
Sbjct: 279 PSQSAIKYRKQVILMLGTVVL 299


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   FIVIN*HVFFFKSNVQ 49
           F+VI   +FFF +NVQ
Sbjct: 535 FVVIVITIFFFTANVQ 550


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +2

Query: 596 VHKVEYLACEMETMASTRGDI 658
           V K+E LACE++       DI
Sbjct: 179 VSKIESLACELKNTVDDFNDI 199


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +2

Query: 2   FIVIN*HVFFFKSNVQ 49
           F+VI   +FFF +NVQ
Sbjct: 260 FVVIVITIFFFTANVQ 275


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 374 KKPKVGPFFSSQLLY 330
           +KP VG F+ ++LLY
Sbjct: 277 RKPGVGVFWYARLLY 291


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 349 FQVNSYTENGQNHVNIYKKL 290
           +  N+Y E G    ++YK L
Sbjct: 346 YSKNTYNEQGNKLADLYKSL 365


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -1

Query: 349 FQVNSYTENGQNHVNIYKKL 290
           +  N+Y E G    ++YK L
Sbjct: 238 YSKNTYNEQGNKLADLYKSL 257


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +2

Query: 485 SSINNGGDGFECQ-HGPPECFGNLIQD 562
           S+ NN  +GF CQ +    C G  + +
Sbjct: 242 SNYNNYQEGFSCQYYQGKNCVGGKVDE 268


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,809
Number of Sequences: 336
Number of extensions: 4092
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18218375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)