Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e23
         (168 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389           28   1.2  
11_01_0467 + 3621266-3621401,3621531-3622699,3622815-3623128,362...    27   1.5  
11_01_0464 + 3597568-3600244,3600345-3600742                           27   2.0  
11_01_0455 + 3517281-3519798,3519888-3520261                           27   2.7  
01_06_0193 - 27359575-27361962                                         26   3.6  
11_01_0459 + 3546101-3548771,3548871-3549238                           26   4.7  
04_04_0030 + 22279716-22280052,22280644-22281144,22281369-222816...    26   4.7  
08_02_0909 - 22515326-22515418,22515992-22516150,22516583-225166...    25   8.2  

>11_01_0451 + 3499084-3501757,3501907-3502275,3502358-3502389
          Length = 1024

 Score = 27.9 bits (59), Expect = 1.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 10  STSNLIENEENNFLGFDNPNILKLTKMKWLS 102
           S  NLI+   N+F G    +I KLTK+ WL+
Sbjct: 288 SKLNLIDISINSFTGVVPRSIGKLTKLSWLN 318


>11_01_0467 +
           3621266-3621401,3621531-3622699,3622815-3623128,
           3623276-3623937,3624040-3624401
          Length = 880

 Score = 27.5 bits (58), Expect = 1.5
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +1

Query: 4   SESTSNLIENEENNFLGFDNPNILKLTKMKWLS 102
           + S  NLI+  ENNF G    +I KL K+  LS
Sbjct: 243 NSSKLNLIDMAENNFTGVIPSSIGKLAKLNVLS 275


>11_01_0464 + 3597568-3600244,3600345-3600742
          Length = 1024

 Score = 27.1 bits (57), Expect = 2.0
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +1

Query: 22  LIENEENNFLGFDNPNILKLTKMKWLS 102
           LI+   NNF G    +I KLTK+ WL+
Sbjct: 292 LIDVSNNNFSGGLASSIGKLTKLSWLN 318


>11_01_0455 + 3517281-3519798,3519888-3520261
          Length = 963

 Score = 26.6 bits (56), Expect = 2.7
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 25  IENEENNFLGFDNPNILKLTKMKWLS 102
           +E   NNF G    +I KLTK+ WL+
Sbjct: 241 LELASNNFTGVVPRSIGKLTKLSWLN 266


>01_06_0193 - 27359575-27361962
          Length = 795

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +1

Query: 22  LIENEENNFLGFDNPNILKL 81
           L+    N+FL FDN N+L+L
Sbjct: 170 LVSQSGNHFLYFDNDNVLRL 189


>11_01_0459 + 3546101-3548771,3548871-3549238
          Length = 1012

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 10  STSNLIENE--ENNFLGFDNPNILKLTKMKWLS 102
           + SNL E +   NNF G    +I KL+K+ WLS
Sbjct: 286 NASNLRELDISSNNFTGVVPSSIGKLSKLYWLS 318


>04_04_0030 +
           22279716-22280052,22280644-22281144,22281369-22281692,
           22281860-22281945,22282105-22282517,22282612-22282878,
           22282977-22283730
          Length = 893

 Score = 25.8 bits (54), Expect = 4.7
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 25  IENEENNFLGFDNPNILKLTKMKWLSEN 108
           I+      L +D P+I+K  K  WL ++
Sbjct: 370 IQENSEGLLRYDTPDIIKKDKFAWLRDD 397


>08_02_0909 -
           22515326-22515418,22515992-22516150,22516583-22516658,
           22517980-22518141,22518826-22519259,22519723-22521414
          Length = 871

 Score = 25.0 bits (52), Expect = 8.2
 Identities = 9/22 (40%), Positives = 16/22 (72%)
 Frame = +1

Query: 58  DNPNILKLTKMKWLSENNDEAL 123
           DNP  ++L++  WLSE++ E +
Sbjct: 533 DNPVTVQLSECSWLSEDDFETI 554


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.306    0.125    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,116,082
Number of Sequences: 37544
Number of extensions: 32589
Number of successful extensions: 72
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 14,793,348
effective HSP length: 36
effective length of database: 13,441,764
effective search space used: 255393516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)