Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e23
         (168 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT016044-1|AAV36929.1|  669|Drosophila melanogaster LP20373p pro...    27   2.7  
AY118341-1|AAM48370.1|  543|Drosophila melanogaster LD44641p pro...    27   2.7  
AE014297-3459|AAF56236.1|  662|Drosophila melanogaster CG13605-P...    27   2.7  

>BT016044-1|AAV36929.1|  669|Drosophila melanogaster LP20373p
           protein.
          Length = 669

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 101 LRTTMKRLILALLPHHLHRVPV 166
           L T + +LI+ +LPHHL R+ V
Sbjct: 498 LLTMLVKLIITMLPHHLMRLKV 519


>AY118341-1|AAM48370.1|  543|Drosophila melanogaster LD44641p
           protein.
          Length = 543

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 101 LRTTMKRLILALLPHHLHRVPV 166
           L T + +LI+ +LPHHL R+ V
Sbjct: 372 LLTMLVKLIITMLPHHLMRLKV 393


>AE014297-3459|AAF56236.1|  662|Drosophila melanogaster CG13605-PA
           protein.
          Length = 662

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +2

Query: 101 LRTTMKRLILALLPHHLHRVPV 166
           L T + +LI+ +LPHHL R+ V
Sbjct: 498 LLTMLVKLIITMLPHHLMRLKV 519


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.306    0.125    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,496,348
Number of Sequences: 53049
Number of extensions: 61789
Number of successful extensions: 71
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 24,988,368
effective HSP length: 36
effective length of database: 23,078,604
effective search space used: 438493476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)