Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e23
(168 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 27 1.8
Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical pr... 26 4.1
Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical pr... 25 5.4
U97592-3|AAB52869.1| 304|Caenorhabditis elegans Hypothetical pr... 25 5.4
AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical ... 25 5.4
AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical ... 25 5.4
AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical ... 25 5.4
Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical pr... 25 7.2
AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical ... 25 9.5
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 13 TSNLIENEENNFLGFDNPNILKLTKMKWLSENN 111
T ++ N FLGF+N LK KMK+ ++ N
Sbjct: 1800 TPYIMNNGAKKFLGFENERSLK-EKMKYATDRN 1831
>Z68219-3|CAA92480.2| 747|Caenorhabditis elegans Hypothetical
protein T05A1.3 protein.
Length = 747
Score = 25.8 bits (54), Expect = 4.1
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 10 STSNLIENE-ENNFLGFDNPNILKLTKMKWLSENNDE 117
S NLI + +N +GF ++ LTK+K ++ NN++
Sbjct: 163 SLQNLIHLDVSDNDIGFLTNTLISLTKLKVITMNNNK 199
>Z82075-6|CAN99721.1| 1047|Caenorhabditis elegans Hypothetical
protein W07A8.2c protein.
Length = 1047
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 844 ISEKENNDLGFTDPNELTIWK 864
>Z82075-5|CAD54162.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 818 ISEKENNDLGFTDPNELTIWK 838
>Z82075-4|CAB04932.1| 1023|Caenorhabditis elegans Hypothetical
protein W07A8.2a protein.
Length = 1023
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 820 ISEKENNDLGFTDPNELTIWK 840
>U97592-3|AAB52869.1| 304|Caenorhabditis elegans Hypothetical
protein C14A11.2 protein.
Length = 304
Score = 25.4 bits (53), Expect = 5.4
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = -2
Query: 92 FIFVNLSIFGLSKPRKLFSSFSIK 21
F+ N+S+ ++PRKLF+ + IK
Sbjct: 131 FLLQNMSVDDDNEPRKLFTLYDIK 154
>AL021489-6|CAN99715.1| 1047|Caenorhabditis elegans Hypothetical
protein W07A8.2c protein.
Length = 1047
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 844 ISEKENNDLGFTDPNELTIWK 864
>AL021489-5|CAD54166.1| 1021|Caenorhabditis elegans Hypothetical
protein W07A8.2b protein.
Length = 1021
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 818 ISEKENNDLGFTDPNELTIWK 838
>AL021489-4|CAA16371.1| 1023|Caenorhabditis elegans Hypothetical
protein W07A8.2a protein.
Length = 1023
Score = 25.4 bits (53), Expect = 5.4
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 25 IENEENNFLGFDNPNILKLTK 87
I +ENN LGF +PN L + K
Sbjct: 820 ISEKENNDLGFTDPNELTIWK 840
>Z81502-5|CAB04108.2| 672|Caenorhabditis elegans Hypothetical
protein F14B6.5 protein.
Length = 672
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 7 ESTSNLIENEENNFLGFDNPNILKL 81
E + LIE+EENN P+IL L
Sbjct: 227 EECNKLIEDEENNTQKAQKPSILHL 251
>AF067948-7|AAC17699.1| 643|Caenorhabditis elegans Hypothetical
protein T27C4.2 protein.
Length = 643
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +1
Query: 4 SESTSNLIENEENNFLGFDNPNILK 78
SE + NEENNF N NI K
Sbjct: 13 SEKNELTLRNEENNFSKNSNENINK 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.306 0.125 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,906,229
Number of Sequences: 27780
Number of extensions: 33997
Number of successful extensions: 71
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71
length of database: 12,740,198
effective HSP length: 36
effective length of database: 11,740,118
effective search space used: 223062242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (22.0 bits)
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