Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e21
(606 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 100 2e-21
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 100 2e-21
U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc metallopro... 86 2e-17
AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix metall... 86 2e-17
AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical pr... 60 9e-10
U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like prot... 60 9e-10
AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical ... 58 6e-09
AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix metall... 55 5e-08
Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical pr... 32 0.28
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 29 2.6
U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell m... 28 5.9
AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein. 28 5.9
U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of ... 27 7.9
U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of ... 27 7.9
U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of ... 27 7.9
AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gat... 27 7.9
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 99.5 bits (237), Expect = 2e-21
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 175 QSISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 354
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 355 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 531
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 532 FPFDGPGRVVAHAFPPPLGDIHFDD 606
+PFDG G V+AHA P G HFDD
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDD 228
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 99.5 bits (237), Expect = 2e-21
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 1/145 (0%)
Frame = +1
Query: 175 QSISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKR 354
Q A++K Q FAG+ +TG LD TK RCG+ D + + ++ W+K
Sbjct: 88 QVFKSAIRKFQEFAGIAKTGFLDAATKAKMALSRCGVTDAPLALTSGSSQF----KWSKT 143
Query: 355 EVTYRLLNGSSTMSKDRIERLLENGLEVWAPHGNLHFTKLDEGK-ADIQVYFASGNHGDG 531
+TY + + SS +SKD + R + +W+ L F+++ G +DI++ F NH D
Sbjct: 144 RLTYSIESWSSDLSKDDVRRAISEAYGLWSKVTPLEFSEVPAGSTSDIKIRFGVRNHNDP 203
Query: 532 FPFDGPGRVVAHAFPPPLGDIHFDD 606
+PFDG G V+AHA P G HFDD
Sbjct: 204 WPFDGEGGVLAHATMPESGMFHFDD 228
>U41266-1|AAM48565.1| 521|Caenorhabditis elegans Zinc
metalloprotease protein 1 protein.
Length = 521
Score = 86.2 bits (204), Expect = 2e-17
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Frame = +1
Query: 97 LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKR 276
+D FL +YGYL+ +S+S+S+A+K MQ AGL +TG LDE T Q+ +R R
Sbjct: 24 VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79
Query: 277 CGLKDIDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAP 447
CG D+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+
Sbjct: 80 CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSE 139
Query: 448 HGNLHFTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDD 606
++ + + + NH FD + +AHAF P G IH +D
Sbjct: 140 LADVEIVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHIND 191
>AB007817-1|BAA28353.1| 521|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 521
Score = 86.2 bits (204), Expect = 2e-17
Identities = 54/174 (31%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
Frame = +1
Query: 97 LDEVNFLLQYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKR 276
+D FL +YGYL+ +S+S+S+A+K MQ AGL +TG LDE T Q+ +R R
Sbjct: 24 VDHTKFLQKYGYLTSG----DNQLSSESLSDALKNMQRMAGLEETGELDERTIQMMERPR 79
Query: 277 CGLKDIDEDSHARNRRYI-IQEGWNKREVTY--RLLNGSSTMSKDRIERLLENGLEVWAP 447
CG D+++ +R +RY Q W ++ +TY + + S+ +S D + R + W+
Sbjct: 80 CGHPDVEDHQKSRGKRYAPPQFKWKEKIITYGCKAVGTSTRISLDDLRRTMHQAASQWSE 139
Query: 448 HGNLHFTKLDEGKADIQVYFASGNHGD-GFPFDGPGRVVAHAFPPPLGDIHFDD 606
++ + + + NH FD + +AHAF P G IH +D
Sbjct: 140 LADVEIVESSVKNPMMVISAGRENHYPCTVRFD--TKTLAHAFFPTNGQIHIND 191
>AF040648-1|AAK21412.1| 519|Caenorhabditis elegans Hypothetical
protein H19M22.3a protein.
Length = 519
Score = 63.7 bits (148), Expect = 1e-10
Identities = 55/192 (28%), Positives = 89/192 (46%), Gaps = 30/192 (15%)
Frame = +1
Query: 121 QYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKRCGLKDIDE 300
+YGYL G+ ++ + Q +A+ Q + QTG +DE T + + RC D+ +
Sbjct: 64 KYGYLK----GIDHS-SPQEFRQALMFFQEVLEVEQTGNVDEMTVEAASKPRCTQTDVRQ 118
Query: 301 DSHARNRRYIIQEG--W---NKREVTYRLLNGSSTMSKDRIE--RLLENGLEVWAPHGNL 459
+ R +R+ + + W + + VT + T DR+E +++E ++W+ +
Sbjct: 119 EQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYTSDIDRLETRKVVEKAFKLWSSQSYI 178
Query: 460 HFTKL---------DEGKADIQVYFASGNHGDGFPFDGPG---------RVVAHAFPP-- 579
K + +ADI + +A GNHGD FDG V+AH F P
Sbjct: 179 KNEKKVTLTFQEASSKDEADINILWAEGNHGDEHDFDGANGKIEGNKKENVLAHTFFPGY 238
Query: 580 --PL-GDIHFDD 606
PL GDIHFDD
Sbjct: 239 ARPLNGDIHFDD 250
>Z95309-1|CAB08559.2| 446|Caenorhabditis elegans Hypothetical
protein H36L18.1 protein.
Length = 446
Score = 60.5 bits (140), Expect = 9e-10
Identities = 26/45 (57%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
Frame = +1
Query: 475 DEGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPL-GDIHFDD 606
DE KA+I + FA+G+H DG PFDG G ++AHAF P GD+HFD+
Sbjct: 21 DEQKANIDIVFAAGDHEDGEPFDGKGNILAHAFFPRYGGDVHFDE 65
>U00038-1|AAA50663.2| 279|Caenorhabditis elegans Hypothetical
protein T21D11.1 protein.
Length = 279
Score = 60.5 bits (140), Expect = 9e-10
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 310 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 477
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 478 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFD 603
+ DI + F G H DGFPFDG VVAHAF P G +HFD
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFD 141
>AF099191-1|AAF78096.1| 279|Caenorhabditis elegans MMP-like protein
protein.
Length = 279
Score = 60.5 bits (140), Expect = 9e-10
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 310 ARNRRYIIQ-EGWNKREVTYRLLNGSSTMSKDR--IERLLENGLEVWAPHGNLHFTKLD- 477
+R +RY+I+ + W K +T++L + + D + + W+ ++ F ++
Sbjct: 37 SREKRYVIRAKRWKKHTLTWQLQT-QNLLDPDVFIVRNTMHRAFNEWSTVSSVDFREIPP 95
Query: 478 ----EGKADIQVYFASGNHGDGFPFDGPGRVVAHAFPPPLGDIHFD 603
+ DI + F G H DGFPFDG VVAHAF P G +HFD
Sbjct: 96 DLVTKQPPDIYIAFEKGEHSDGFPFDGQDGVVAHAFYPRDGRLHFD 141
>AF040648-3|AAL06034.2| 453|Caenorhabditis elegans Hypothetical
protein H19M22.3c protein.
Length = 453
Score = 57.6 bits (133), Expect = 6e-09
Identities = 47/157 (29%), Positives = 73/157 (46%), Gaps = 30/157 (19%)
Frame = +1
Query: 226 QTGVLDEPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEG--W---NKREVTYRLLNGSST 390
QTG +DE T + + RC D+ ++ R +R+ + + W + + VT + T
Sbjct: 62 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFTLSKRAKWAHASGQSVTLKWYISDYT 121
Query: 391 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 537
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 122 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 181
Query: 538 FDGPG---------RVVAHAFPP----PL-GDIHFDD 606
FDG V+AH F P PL GDIHFDD
Sbjct: 182 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDD 218
>AB007816-1|BAA28352.1| 394|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 394
Score = 54.8 bits (126), Expect = 5e-08
Identities = 48/157 (30%), Positives = 71/157 (45%), Gaps = 30/157 (19%)
Frame = +1
Query: 226 QTGVLDEPTKQLFKRKRCGLKDIDEDSHARNRRY----IIQEGWNK-REVTYRLLNGSST 390
QTG +DE T + + RC D+ ++ R +R+ Q G + VT + T
Sbjct: 3 QTGNVDEMTVEAASKPRCTQTDVRQEQTKRTKRFSSLKTSQVGARSGQSVTLKWYISDYT 62
Query: 391 MSKDRIE--RLLENGLEVWAPHGNLHFTKL---------DEGKADIQVYFASGNHGDGFP 537
DR+E +++E ++W+ + K + +ADI + +A GNHGD
Sbjct: 63 SDIDRLETRKVVEKAFKLWSSQSYIKNEKKVTLTFQEASSKDEADINILWAEGNHGDEHD 122
Query: 538 FDGPG---------RVVAHAFPP----PL-GDIHFDD 606
FDG V+AH F P PL GDIHFDD
Sbjct: 123 FDGANGKIEGNKKENVLAHTFFPGYARPLNGDIHFDD 159
>Z78414-1|CAB01669.2| 472|Caenorhabditis elegans Hypothetical
protein W09D12.1 protein.
Length = 472
Score = 43.2 bits (97), Expect = 1e-04
Identities = 32/141 (22%), Positives = 59/141 (41%), Gaps = 4/141 (2%)
Frame = +1
Query: 97 LDEVN-FLLQYGYLSKDLAGVGYTYTSQS---ISEAVKKMQAFAGLPQTGVLDEPTKQLF 264
+DE +L ++GY+ + T S +A+ + Q+ +G +D PT+
Sbjct: 34 MDEAKVYLFKFGYMIPEPHQNVKTIQEPSEKQTKDALIRFQSAFLYYSSGDVDVPTQAKM 93
Query: 265 KRKRCGLKDIDEDSHARNRRYIIQEGWNKREVTYRLLNGSSTMSKDRIERLLENGLEVWA 444
RC D+D+ +E W K+ +TY+++N +T+S+ +I E W
Sbjct: 94 NEWRCANNDMDKGQPIPPASK--KELWTKKSLTYKVVNTPNTLSQAQIRSAAHEAFEQWT 151
Query: 445 PHGNLHFTKLDEGKADIQVYF 507
F + DI + F
Sbjct: 152 RASGFKFVETTGATPDITITF 172
>Z81502-2|CAB04106.2| 720|Caenorhabditis elegans Hypothetical
protein F14B6.2 protein.
Length = 720
Score = 32.3 bits (70), Expect = 0.28
Identities = 24/90 (26%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Frame = +1
Query: 181 ISEAVKKMQAFAGLPQTGVLDEPTKQLFKRKRCGLKDIDEDSHARNRRYIIQEGWNKREV 360
+SE+ + M L T L T + K+ G+K++ +++H R+++ +++E + +
Sbjct: 404 LSESTRMMWDMDELKYTTFLAPKTTEQTKQVEEGVKEVIQEAHERSQKPMLKETFEEATT 463
Query: 361 -TYRLLNGSSTMSKDRIERLLENGLEVWAP 447
T + L G MSKD+ E+ E E + P
Sbjct: 464 STEKPLPGG--MSKDQWEKKKE-AFEAYTP 490
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 29.1 bits (62), Expect = 2.6
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +3
Query: 483 QSGHTSLFRFRQPWRRVPLRWPWSSSGSRVSTATRRYT 596
+ G T L FR P+R PL+ P + SG + YT
Sbjct: 259 RQGRTRLNDFRLPYRSPPLQVPTADSGHMIDFYLSNYT 296
>U39652-1|AAA80403.2| 552|Caenorhabditis elegans Abnormal cell
migration protein 23 protein.
Length = 552
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 121 QYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDEPTKQLFKR 270
+Y Y + D+ G+G Y +++I+ KK Q + + + E KQL+ R
Sbjct: 366 EYWYSTHDVLGLGGQYDAENIA---KKTQQYCSKRWSTIQAESKKQLYPR 412
>AB126261-1|BAD02168.1| 552|Caenorhabditis elegans MIG-23 protein.
Length = 552
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +1
Query: 121 QYGYLSKDLAGVGYTYTSQSISEAVKKMQAFAGLPQTGVLDEPTKQLFKR 270
+Y Y + D+ G+G Y +++I+ KK Q + + + E KQL+ R
Sbjct: 366 EYWYSTHDVLGLGGQYDAENIA---KKTQQYCSKRWSTIQAESKKQLYPR 412
>U64843-16|AAX55689.1| 442|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform c protein.
Length = 442
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 356 SRLFHPSCIMYLRFLACESS---SISFKPHLFLLNNCLVGSSSTPVCGSPAK 210
++L+H S + + AC+ + P ++ N C++ S T V SP++
Sbjct: 84 TQLWHDSALSFAHLPACKRNITMETRLLPKIWSPNTCMINSKRTTVHASPSE 135
>U64843-15|AAF98227.2| 489|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform a protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 356 SRLFHPSCIMYLRFLACESS---SISFKPHLFLLNNCLVGSSSTPVCGSPAK 210
++L+H S + + AC+ + P ++ N C++ S T V SP++
Sbjct: 84 TQLWHDSALSFAHLPACKRNITMETRLLPKIWSPNTCMINSKRTTVHASPSE 135
>U64843-14|AAM45353.1| 475|Caenorhabditis elegans Modulation of
locomotion defectiveprotein 1, isoform b protein.
Length = 475
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 356 SRLFHPSCIMYLRFLACESS---SISFKPHLFLLNNCLVGSSSTPVCGSPAK 210
++L+H S + + AC+ + P ++ N C++ S T V SP++
Sbjct: 84 TQLWHDSALSFAHLPACKRNITMETRLLPKIWSPNTCMINSKRTTVHASPSE 135
>AF303088-1|AAG36975.1| 489|Caenorhabditis elegans serotonin-gated
chloride channel protein.
Length = 489
Score = 27.5 bits (58), Expect = 7.9
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -2
Query: 356 SRLFHPSCIMYLRFLACESS---SISFKPHLFLLNNCLVGSSSTPVCGSPAK 210
++L+H S + + AC+ + P ++ N C++ S T V SP++
Sbjct: 84 TQLWHDSALSFAHLPACKRNITMETRLLPKIWSPNTCMINSKRTTVHASPSE 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,031,450
Number of Sequences: 27780
Number of extensions: 378766
Number of successful extensions: 939
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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