Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e20
(344 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 37 8e-04
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 33 0.012
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 31 0.066
SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr ... 30 0.088
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 27 1.1
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 26 1.4
SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces pombe... 26 1.9
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 26 1.9
SPAC18B11.04 |ncs1||related to neuronal calcium sensor Ncs1|Schi... 25 2.5
SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog Taz1|Schizosacc... 25 2.5
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 25 3.3
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 25 3.3
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 25 3.3
SPBC215.01 ||SPBC3B9.20|GTPase activating protein|Schizosaccharo... 25 3.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 24 5.8
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 24 5.8
SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyce... 24 5.8
SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces... 24 7.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 24 7.6
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 37.1 bits (82), Expect = 8e-04
Identities = 16/53 (30%), Positives = 28/53 (52%)
Frame = +1
Query: 97 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEF 255
F+ D DG+ + EE + + G L++ E ++ + DTD G I+ +EF
Sbjct: 91 FKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEF 143
Score = 28.7 bits (61), Expect = 0.27
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +1
Query: 109 DDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSES 288
D DG+ + E ++ G +E +++ ++ D D +G+I EFL + M ++
Sbjct: 24 DQDGN--ITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDT 81
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 33.1 bits (72), Expect = 0.012
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = +1
Query: 91 RIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 258
R F DDD + ++ KE ++ E E + +FD D G I+ EF+
Sbjct: 114 RAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFI 169
Score = 31.1 bits (67), Expect = 0.050
Identities = 17/76 (22%), Positives = 32/76 (42%), Gaps = 6/76 (7%)
Frame = +1
Query: 85 LGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL-- 258
+ F+ D D ++ E ++ G KSE ++ FD G + +++F+
Sbjct: 39 INEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRV 98
Query: 259 ----IKIRPPMSESRR 294
I R P+ E +R
Sbjct: 99 MTEKIVERDPLEEIKR 114
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 30.7 bits (66), Expect = 0.066
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 31 LEKLRLLCLSRGASGILGLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEEL-F 207
+++ L + AS L R+F +D+DG ++ +EF+ + + NK E + F
Sbjct: 41 IDRNEFLSIPSVASNPLA-SRLFSVVDEDGGGDVDFQEFINSLSVFSVHGNKEEKLKFAF 99
Query: 208 SQFDTDSSGSISLDEFLIKIR 270
+D D G IS E + ++
Sbjct: 100 KIYDIDRDGYISNGELYLVLK 120
Score = 24.6 bits (51), Expect = 4.4
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +1
Query: 97 FRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 258
F ++D + S +++ EFL I + A LFS D D G + EF+
Sbjct: 30 FIKIDANQSGSIDRNEFL-SIPSVA---SNPLASRLFSVVDEDGGGDVDFQEFI 79
>SPAC15A10.08 |ain1||alpha-actinin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 621
Score = 30.3 bits (65), Expect = 0.088
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +1
Query: 82 GLGRIFRRMDDDGSKLLNKEEFLYGIKETGLELNKSEAEELFSQFDTDSSG 234
G+ ++FR + S +LN+ EF + GL + E LF + G
Sbjct: 488 GITKVFRHFEKKKSNMLNEVEFYAALASLGLVYDTEEGTALFHRAANSEEG 538
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 26.6 bits (56), Expect = 1.1
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +2
Query: 134 TKKNSFMASRKQGWNLIKVKPKNSSVNSTQTVVAQSVLMNSLLKSVLP 277
+ +NS + K+ + +V PK NS T AQ V + SVLP
Sbjct: 32 SSRNSSSSLVKRSYVSSRVSPKKPQHNSDATSSAQKVANKTHTSSVLP 79
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.2 bits (55), Expect = 1.4
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +1
Query: 172 LELNKSEA--EELFSQFDTDSSGSISLDEF 255
L LN S EE F + D D SG +S +EF
Sbjct: 326 LHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPCC613.04c |rng3||UCS-domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 746
Score = 25.8 bits (54), Expect = 1.9
Identities = 10/34 (29%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = -2
Query: 154 HKGIL-LCSVVYFHHHPCDGKFFQVPRSLKHLGT 56
H+G++ +C++VY KF + P++++ L T
Sbjct: 686 HRGLVCICNIVYSKDQEIFNKFIKTPKAVETLRT 719
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 25.8 bits (54), Expect = 1.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 184 KSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQHSRSLTRLVT 339
K++ LFS+ +G IS+ E K PP S S R V + ++T ++
Sbjct: 38 KAQLITLFSKLRRAKNGLISMTELQQKNVPPSSRSPRRRVAGVTNNVTARIS 89
>SPAC18B11.04 |ncs1||related to neuronal calcium sensor
Ncs1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 190
Score = 25.4 bits (53), Expect = 2.5
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 130 LNKEEFLYGIKETGLELNKSE-AEELFSQFDTDSSGSISLDEFL 258
LNK EF K+ + S AE +F+ FD D +G I EF+
Sbjct: 43 LNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFI 86
>SPAC16A10.07c |taz1|myb1, myb|human TRF ortholog
Taz1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 663
Score = 25.4 bits (53), Expect = 2.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 196 EELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIV 303
E + F TDS+ SI EF++ P S N+V
Sbjct: 273 ELVIRYFGTDSNPSIDASEFILSCLPYTSLDALNVV 308
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 25.0 bits (52), Expect = 3.3
Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 94 IFRRMDDDGSKLLNKEEFLYGIKETGL-ELNKSEAE 198
IFRR+ D S + ++ FL+ G+ E+ +EAE
Sbjct: 377 IFRRLGDQFSAMFRRKAFLHWYTGEGMDEMEFTEAE 412
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 25.0 bits (52), Expect = 3.3
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 259 IKIRPPMSESRRNIVEQHSRSL 324
I+ PP +E+R I+ HSRS+
Sbjct: 312 IEFPPPSAEARAEILRIHSRSM 333
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 25.0 bits (52), Expect = 3.3
Identities = 20/55 (36%), Positives = 26/55 (47%)
Frame = +1
Query: 145 FLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFLIKIRPPMSESRRNIVEQ 309
F+ +E+ LE E FSQ +S + SL+ I P SRR IVEQ
Sbjct: 680 FILPNEESLLEKYWINYNESFSQLSRESLFT-SLESPFTDIESPTIVSRRKIVEQ 733
>SPBC215.01 ||SPBC3B9.20|GTPase activating
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.0 bits (52), Expect = 3.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 142 EFLYGIKETGLELNKSEAEELFSQFDTDSSGSISLDEFL 258
E+ G+ + + S LF +FD +GS+SL + +
Sbjct: 564 EWAKGLDAAAINNSSSFLRHLFLRFDKSMTGSLSLQDLV 602
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 24.2 bits (50), Expect = 5.8
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 175 ELNKSEAEELFSQFDTDSSGSISLDEFLIKI 267
+L ++E E +++ D GS+ DEF + +
Sbjct: 853 KLTRTELEHIWNLCDHGDKGSLDRDEFAVAL 883
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 24.2 bits (50), Expect = 5.8
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +2
Query: 38 NCACFACPEVLQGSWDLEEFSVAWMMMEVNY 130
N F E + +D EEFSV W + + +
Sbjct: 41 NTTAFWFVEFTESKYDKEEFSVIWNEVSMEF 71
>SPAC12G12.15 |sif3||Sad1 interacting factor 3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 510
Score = 24.2 bits (50), Expect = 5.8
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 80 KIPEAPRDKQSKRSFSRGSVACV 12
K+ PRDK+ + F R + CV
Sbjct: 128 KLENLPRDKREELGFPRATAYCV 150
>SPCC1450.02 ||SPCC191.13|bromodomain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 578
Score = 23.8 bits (49), Expect = 7.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 197 KNSSVNSTQTVVAQSVLMNSLLKSVLP 277
+NSSV+ST VA S + +VLP
Sbjct: 218 RNSSVSSTSASVAASTAPKAASPAVLP 244
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 23.8 bits (49), Expect = 7.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 103 RMDDDGSKLLNKEEFLYGIKETGLELNKS 189
R DDD + +EE + IK ELN S
Sbjct: 252 RNDDDSGAFIQREERIERIKAEITELNHS 280
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.135 0.363
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,344,234
Number of Sequences: 5004
Number of extensions: 24515
Number of successful extensions: 116
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 115
length of database: 2,362,478
effective HSP length: 64
effective length of database: 2,042,222
effective search space used: 102111100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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