Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e20
         (344 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   1.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   1.8  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   3.1  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   4.1  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    20   7.2  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    20   7.2  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       20   9.5  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    20   9.5  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +2

Query: 182  IKVKPKNSSVNSTQTVVAQSVLMNSLLKSVLPCRN 286
            +KV+ +  S  S Q    Q+++ N   KS+L   N
Sbjct: 970  VKVQSQQQSQQSQQQQQQQTIVTNQAGKSILQTAN 1004


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 1.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 85  VPRSLKHLGTSKASAVSPED 26
           +P++L  +GTS  S V P D
Sbjct: 467 IPQNLGVIGTSNLSLVFPND 486


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = +1

Query: 94  IFRRMDDDGSKLLNKEEFLYGIKETGLE--LNKSEAEELFSQFDTDSSGSISLDEF 255
           +F   D + +  L +EE     +   LE          + S  DTD  G ++++EF
Sbjct: 241 MFSHYDRNNNGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEF 296


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 21.0 bits (42), Expect = 4.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 121 FHHHPCDGKFFQVPRSLKHL 62
           +H   CD +F QV    +HL
Sbjct: 38  YHCSHCDRQFVQVANLRRHL 57


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 5/17 (29%), Positives = 10/17 (58%)
 Frame = +2

Query: 23  LILWRNCACFACPEVLQ 73
           +++W    C A P+ +Q
Sbjct: 176 IVIWLLALCLAVPQAIQ 192


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 20.2 bits (40), Expect = 7.2
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 323 KLLECCSTMLRRDSDMGGRILIRNSSRLI 237
           +L +C +  + RD+   GR+  R  +R++
Sbjct: 124 RLKKCIAVGMSRDAVRFGRVPKREKARIL 152


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 126 FTSIIIHATENSSKSQD 76
           +TSI++     S KS+D
Sbjct: 224 YTSILLEIRRRSKKSED 240


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 19.8 bits (39), Expect = 9.5
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +2

Query: 47  CFACPEVLQGSWDLEEFSVAWMMM 118
           C A PE ++  +  +  SVA++++
Sbjct: 195 CIATPEAIELHFTTDHPSVAYLLV 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.135    0.363 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,707
Number of Sequences: 438
Number of extensions: 1317
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  7812315
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)