Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e17
         (704 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix...    30   0.021
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.60 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.60 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.4  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.2  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    22   5.6  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    22   5.6  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    22   5.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.4  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   7.4  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   7.4  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   9.8  

>AJ457831-1|CAD29886.1|  249|Tribolium castaneum helix-loop-helix
           transcription factor protein.
          Length = 249

 Score = 29.9 bits (64), Expect = 0.021
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = +2

Query: 338 VGAGPNRFQIQEIIYPARNNNVKLEVELKDSEDHDKIAVAAVLQLSNADITNLLKYIKTR 517
           +G G N   +Q    P  NN +++    K   D+ +     + +   A I N L  +KT 
Sbjct: 1   MGTGTNNTPVQPNAIPTTNNQIEMAAATKRVSDNRRSNKPIMEKRRRARINNSLNELKT- 59

Query: 518 LFENSMLKD 544
           L  ++M KD
Sbjct: 60  LILDAMKKD 68


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 236 ISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNR 358
           +  FIN L +    +A ++NT++G+QN +       +  NR
Sbjct: 370 VYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNR 410


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 12/41 (29%), Positives = 22/41 (53%)
 Frame = +2

Query: 236 ISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNR 358
           +  FIN L +    +A ++NT++G+QN +       +  NR
Sbjct: 262 VYSFINNLTDRKLLSAWYMNTVLGHQNPYLALPKTDSSDNR 302


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 280 ITLQ-CF*KEVYEFTYFDLFFVGCYCSQGYLWVIN 179
           +TL  CF   +Y FT+   FF  C C    L V+N
Sbjct: 58  VTLHVCFNSYMYAFTHIFFFFAIC-CDFIALIVVN 91


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +1

Query: 343 SWPEPIPDPRNHL-PSTE*QCKIRSRAERL*RSRQNSSGRSLAT 471
           S PE    P   L PS   +  +R+RAE++ R + NS    LAT
Sbjct: 12  SAPEACVSPEGSLLPSNSRE--MRNRAEKMRRDKLNSYIGELAT 53


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +2

Query: 590 RPFNDKQYRVMERIVISSPTKCLTTVKKRKDEKIF 694
           +P +   +RV +  V+ SP+   ++ + R  E +F
Sbjct: 267 QPLDLYNFRVPQHQVLQSPSSTSSSPEPRSPESLF 301


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 371 EIIYPARNNNVKLEVELKDSEDHDKIA--VAAVLQLSNADITNLLKYIKTRLFENSMLKD 544
           E I P    N  ++ +L+D E   KI        +LS      L+     R+F N ++K 
Sbjct: 346 EYIPPILYYNYTVDRDLQD-EVSQKIRKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKT 404

Query: 545 DLLKGKSM 568
             L  KSM
Sbjct: 405 AKLMAKSM 412


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
 Frame = +2

Query: 371 EIIYPARNNNVKLEVELKDSEDHDKIA--VAAVLQLSNADITNLLKYIKTRLFENSMLKD 544
           E I P    N  ++ +L+D E   KI        +LS      L+     R+F N ++K 
Sbjct: 346 EYIPPILYYNYTVDRDLQD-EVSQKIRKYYLGEKKLSKKTFRELVAMFSDRIFINDIVKT 404

Query: 545 DLLKGKSM 568
             L  KSM
Sbjct: 405 AKLMAKSM 412


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 467 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 568
           +LS     +L+     R+F N ++K   L  KSM
Sbjct: 379 KLSKKTFRDLVAMFSDRIFINDIVKTAKLMAKSM 412


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 546 SSFNIEFSNRRVLMYFKRLV 487
           S+F I F N   ++YF R++
Sbjct: 322 SNFEIGFENYYNILYFSRIM 341


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 467 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 568
           +LS      L+     R+F N ++K   L  KSM
Sbjct: 379 KLSKKTFRELVTMFSDRIFINDIVKTAKLMAKSM 412


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +2

Query: 467 QLSNADITNLLKYIKTRLFENSMLKDDLLKGKSM 568
           +LS      L+     R+F N ++K   L  KSM
Sbjct: 379 KLSKRTFRELVAMFSDRIFINDIVKTAKLMAKSM 412


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 9/12 (75%), Positives = 9/12 (75%)
 Frame = +2

Query: 482 DITNLLKYIKTR 517
           DITNLL Y K R
Sbjct: 285 DITNLLGYAKLR 296


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,052
Number of Sequences: 336
Number of extensions: 3453
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)