Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e17
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical pr... 34 0.11
AF106579-7|AAC78199.2| 391|Caenorhabditis elegans Hypothetical ... 28 7.5
AF016686-5|ABO16458.1| 407|Caenorhabditis elegans Hypothetical ... 28 7.5
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 27 9.9
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 9.9
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 9.9
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 27 9.9
U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like p... 27 9.9
AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like ... 27 9.9
>Z81554-5|CAB04510.2| 401|Caenorhabditis elegans Hypothetical
protein F57G4.8 protein.
Length = 401
Score = 33.9 bits (74), Expect = 0.11
Identities = 23/92 (25%), Positives = 42/92 (45%)
Frame = +2
Query: 179 VDHPQIALAAITSYKKQIEISEFINFLLEALERNAVWLNTLVGNQNNFKCALMVGAGPNR 358
+D L+ T +S FI + E R+A+ + + + +FK A ++ PN+
Sbjct: 278 MDDETYKLSKSTGIDNFFHLSHFIISVQEFTTRDAMKIKNIFMKEPSFKYAKILAEIPNQ 337
Query: 359 FQIQEIIYPARNNNVKLEVELKDSEDHDKIAV 454
+I + YPA + L ++ D DK A+
Sbjct: 338 MEILRVFYPAYSE--PLPPGVRYETDGDKFAL 367
>AF106579-7|AAC78199.2| 391|Caenorhabditis elegans Hypothetical
protein F54E2.1 protein.
Length = 391
Score = 27.9 bits (59), Expect = 7.5
Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 9/98 (9%)
Frame = +2
Query: 230 IEISEFINFLLEALERNAVWLNTLVGNQNNFKC------ALMVGAG-PNRFQIQEIIYPA 388
I IS + F +L + + LNTL+GN K +L V A + F + I
Sbjct: 3 ISISLLLTFCKLSLAQQVIPLNTLIGNNFENKIDVTPPFSLYVSAQMDSDFNLNNIYVKT 62
Query: 389 RNNNVKLEVELKDSEDHDKIAVAAVLQLSNADI--TNL 496
+N +K +L+ S H + + Q ++ + TNL
Sbjct: 63 MDNQIKSLKDLRHSRQHAESGPISPFQATSQTLITTNL 100
>AF016686-5|ABO16458.1| 407|Caenorhabditis elegans Hypothetical
protein R07C3.7 protein.
Length = 407
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/74 (31%), Positives = 34/74 (45%)
Frame = +2
Query: 398 NVKLEVELKDSEDHDKIAVAAVLQLSNADITNLLKYIKTRLFENSMLKDDLLKGKSMGVG 577
N+K++ L SE+ DKI A LS+ + L KT F+N M++ L G G
Sbjct: 236 NLKVQHLLIPSEELDKILEAIRPNLSSLESLESLTIEKTYEFQNPMVQAIPLIILKYGYG 295
Query: 578 FALLRPFNDKQYRV 619
+ L N R+
Sbjct: 296 YHTLLRINTGYPRI 309
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +2
Query: 131 LKKSSTKRPRELGEKVVDHPQIALAAI 211
L++S P EL + +V+HPQIA A +
Sbjct: 150 LQESLKNNPSELHKFLVEHPQIAYAVL 176
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 590 SIRRNLLPSICLLEDRLSTSNSRTGGS*CTLK 495
++ R++L +IC L + +SR GG C LK
Sbjct: 1206 NVDRHILSAICSLHSTVKLFDSRVGGWTCELK 1237
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 590 SIRRNLLPSICLLEDRLSTSNSRTGGS*CTLK 495
++ R++L +IC L + +SR GG C LK
Sbjct: 1206 NVDRHILSAICSLHSTVKLFDSRVGGWTCELK 1237
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 449 AVAAVLQLSNADITNLLKYIKTRLFENSMLKDDLLKGKSMGVGFALLR 592
++A++ SN+D++ LLK + F + +DDL K +G L++
Sbjct: 717 SLASIGSYSNSDVSQLLKELIDVCFCDEDTRDDLYKCGGEAIGQILIK 764
>U23515-15|AAK21452.1| 928|Caenorhabditis elegans Kinesin-like
protein protein 6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 554 KGKSMGVGFALLRPFNDKQYRVMERIVISSPTKCLTTVK--KRKDEKIF 694
KG S+ V + RPFND++ ++VI P + T ++ K DEK F
Sbjct: 3 KGDSIIVAVRV-RPFNDREKTRNCKLVIEMPDEETTVIRDPKTNDEKRF 50
>AB023497-1|BAA88682.1| 928|Caenorhabditis elegans kinesin like
protein KLP-6 protein.
Length = 928
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = +2
Query: 554 KGKSMGVGFALLRPFNDKQYRVMERIVISSPTKCLTTVK--KRKDEKIF 694
KG S+ V + RPFND++ ++VI P + T ++ K DEK F
Sbjct: 3 KGDSIIVAVRV-RPFNDREKTRNCKLVIEMPDEETTVIRDPKTNDEKRF 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,522,696
Number of Sequences: 27780
Number of extensions: 322891
Number of successful extensions: 719
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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