Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e16
         (630 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    31   0.040
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    31   0.040
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    31   0.040
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   2.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.6  
AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.    24   4.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    23   8.0  

>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 403 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 501
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 154


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 403 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 501
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 122 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 154


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 30.7 bits (66), Expect = 0.040
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 403 IPRPGEVLGLVGQNGIGKSTALKILAGKQKPNL 501
           + + GE+L ++G +G GK+T L  LA +  P +
Sbjct: 100 VAKSGELLAVMGSSGAGKTTLLNALAFRSPPGV 132


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -1

Query: 408 WDRQAMELE*VFGVTVGSVFLQVRW 334
           W+ +  E+E  FG  V S F  +RW
Sbjct: 134 WESRIKEIESHFGSVVASYFTFLRW 158


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 21  SKSMDTRMQAVFRQCSLTFNRNVSTKRSRGNR 116
           S+S    +    R  S + +R+VS  RSRG+R
Sbjct: 406 SRSRSKSLSKSSRSRSRSLSRSVSRSRSRGSR 437


>AJ304411-1|CAC39104.1|  187|Anopheles gambiae LDL receptor protein.
          Length = 187

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 435 WPERYRKVYCTEDSCWQ 485
           WP +   V CT   CWQ
Sbjct: 42  WPLQLSGVCCTVPRCWQ 58


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 23.0 bits (47), Expect = 8.0
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +1

Query: 511 TDPPDWQEIL 540
           TDP DWQ++L
Sbjct: 465 TDPRDWQQVL 474


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,021
Number of Sequences: 2352
Number of extensions: 15030
Number of successful extensions: 33
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)