Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e15
         (164 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7QKC0 Cluster: Chromosome chr2 scaffold_112, whole gen...    31   6.7  
UniRef50_Q5CTW3 Cluster: 11 transmembrane domain protein; n=2; C...    30   8.9  
UniRef50_A2E7V3 Cluster: Putative uncharacterized protein; n=1; ...    30   8.9  

>UniRef50_A7QKC0 Cluster: Chromosome chr2 scaffold_112, whole genome
           shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
           chr2 scaffold_112, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 235

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +1

Query: 13  QKSLDTTDFDRVETYITKTSFNKESFKRTIISKYKKNE 126
           QK  D  DFDR+   I +   +KE  + +IIS  K++E
Sbjct: 14  QKLKDDGDFDRLRLMIIRKLKDKEELRNSIISMVKQSE 51


>UniRef50_Q5CTW3 Cluster: 11 transmembrane domain protein; n=2;
           Cryptosporidium|Rep: 11 transmembrane domain protein -
           Cryptosporidium parvum Iowa II
          Length = 482

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 11/26 (42%), Positives = 19/26 (73%)
 Frame = -3

Query: 138 INRYLVLFIF*NYCSLKTFFVKRSLC 61
           INRY++L I+  +C L T  +++S+C
Sbjct: 26  INRYILLIIYCVFCGLTTSAIQQSIC 51


>UniRef50_A2E7V3 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 267

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 25  DTTDFDRVETYITKTSFNKESFKRTIISKYKKNEITIYLDF 147
           D T+    + ++   S  K S K T +SK K  ++T+YL F
Sbjct: 74  DNTEIANFKNFLNMPSLTKISIKNTPVSKEKTLKLTLYLLF 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,619,716
Number of Sequences: 1657284
Number of extensions: 1536851
Number of successful extensions: 5726
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5726
length of database: 575,637,011
effective HSP length: 34
effective length of database: 519,289,355
effective search space used: 10385787100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)