Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e15
(164 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 0.34
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 0.79
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 19 4.2
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 19 5.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 19 5.6
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 19 5.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 19 5.6
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 19 7.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 18 9.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 18 9.7
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 18 9.7
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 18 9.7
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 23.0 bits (47), Expect = 0.34
Identities = 8/29 (27%), Positives = 17/29 (58%)
Frame = +1
Query: 31 TDFDRVETYITKTSFNKESFKRTIISKYK 117
T + +ETYI T+++ ++ + +YK
Sbjct: 192 TGMNNIETYIVNTNYSSKNMREYNDPEYK 220
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.8 bits (44), Expect = 0.79
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +1
Query: 31 TDFDRVETYITKTSFNKESFKRTIISKYK 117
T + +ETYI T+++ + + +YK
Sbjct: 192 TGMNNIETYIVNTNYSSKYMREYNDPEYK 220
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 19.4 bits (38), Expect = 4.2
Identities = 7/19 (36%), Positives = 10/19 (52%)
Frame = -2
Query: 157 FKYENLNKSLSRSFYILKL 101
+ Y N NK L YI+ +
Sbjct: 331 YNYNNYNKKLYYKNYIINI 349
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.0 bits (37), Expect = 5.6
Identities = 4/7 (57%), Positives = 7/7 (100%)
Frame = -3
Query: 66 LCYICFN 46
+C++CFN
Sbjct: 414 VCFVCFN 420
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 19.0 bits (37), Expect = 5.6
Identities = 4/7 (57%), Positives = 7/7 (100%)
Frame = -3
Query: 66 LCYICFN 46
+C++CFN
Sbjct: 414 VCFVCFN 420
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 19.0 bits (37), Expect = 5.6
Identities = 6/16 (37%), Positives = 9/16 (56%)
Frame = -2
Query: 160 FFKYENLNKSLSRSFY 113
+F+ NLN + FY
Sbjct: 443 YFRCSNLNHMMREEFY 458
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 19.0 bits (37), Expect = 5.6
Identities = 4/7 (57%), Positives = 7/7 (100%)
Frame = -3
Query: 66 LCYICFN 46
+C++CFN
Sbjct: 352 VCFVCFN 358
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 18.6 bits (36), Expect = 7.4
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +2
Query: 20 PWIRLILIVL 49
PWI + LIVL
Sbjct: 63 PWILVTLIVL 72
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 151 YENLNKSLSRSFYILKL 101
Y N NK L YI+ +
Sbjct: 97 YNNYNKKLYYKNYIINI 113
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 18.2 bits (35), Expect = 9.7
Identities = 7/17 (41%), Positives = 9/17 (52%)
Frame = -2
Query: 151 YENLNKSLSRSFYILKL 101
Y N NK L YI+ +
Sbjct: 338 YNNYNKKLYYKNYIINI 354
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 3 PWLSKVLGY 29
PW S VLG+
Sbjct: 525 PWWSHVLGW 533
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 18.2 bits (35), Expect = 9.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 3 PWLSKVLGY 29
PW S VLG+
Sbjct: 578 PWWSHVLGW 586
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,671
Number of Sequences: 438
Number of extensions: 460
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used: 2629020
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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