Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e14
(641 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka... 153 5e-36
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|... 142 5e-33
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary... 136 6e-31
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost... 125 1e-27
UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56; Euk... 118 9e-26
UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1; Enceph... 72 1e-11
UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1; ... 69 1e-10
UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3; Eukary... 68 2e-10
UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole ge... 57 3e-07
UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiel... 49 1e-04
UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102... 45 0.001
UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1; ... 44 0.002
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso... 38 0.16
UniRef50_Q9XYB1 Cluster: PugilistDominant; n=1; Drosophila melan... 36 0.83
UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9; Euryar... 35 1.9
UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1; Flavobacteri... 34 3.4
UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse t... 33 5.9
UniRef50_Q8IK87 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_Q0UL60 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
(Human)
Length = 148
Score = 153 bits (370), Expect = 5e-36
Identities = 71/143 (49%), Positives = 87/143 (60%)
Frame = +3
Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
+KTRKLRGHVS NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6 RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65
Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
N++FCP +NLDKLWTLVSEQTR+ A G P+I++V++ PKQPVIV
Sbjct: 66 NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125
Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
VGGACVL A
Sbjct: 126 AKFFSRRAEEKIKSVGGACVLVA 148
>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
(Pig roundworm) (Ascaris lumbricoides)
Length = 133
Score = 142 bits (345), Expect = 5e-33
Identities = 67/115 (58%), Positives = 76/115 (66%)
Frame = +3
Query: 279 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 458
NAGG+HHHRIN DKYHPGYFGK+GMRNFH RKN +CP +NLDKLW+LVSE+TR YA
Sbjct: 20 NAGGQHHHRINFDKYHPGYFGKVGMRNFHVRKNGLYCPTVNLDKLWSLVSEKTRTTYAEK 79
Query: 459 PDGKVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 623
D K PVI++VKA PKQPVIV VGGAC+L A
Sbjct: 80 KD-KAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKFFSRTAEQKIKGVGGACILVA 133
>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
thermophila
Length = 149
Score = 136 bits (328), Expect = 6e-31
Identities = 71/145 (48%), Positives = 83/145 (57%), Gaps = 2/145 (1%)
Frame = +3
Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXN--AGGEHHHRINMDKYHPGYFGKLGMRNFHF 368
KKTRKLRGHVS AGG HHHRI M+K+HPGY+GKLGMR FH
Sbjct: 6 KKTRKLRGHVSHGHGRVGKHRKGGCRGGRGKAGGMHHHRILMEKWHPGYYGKLGMRTFHL 65
Query: 369 RKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVI 548
+KN CPV+N+DKLW+LVS+ TR KYA KVPVI++ KA P QPV+
Sbjct: 66 KKNPLHCPVVNIDKLWSLVSDATRQKYAE-DKKKVPVIDVTKAGFFKVLGKGRLPNQPVV 124
Query: 549 VXXXXXXXXXXXXXXDVGGACVLSA 623
V VGGACVL+A
Sbjct: 125 VKAKYFSKTAERRIVAVGGACVLTA 149
>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
Ostreococcus tauri
Length = 198
Score = 125 bits (301), Expect = 1e-27
Identities = 63/149 (42%), Positives = 78/149 (52%)
Frame = +3
Query: 177 LQATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMR 356
L T K RK RGHVS AGG+HHHRI MDKYHPGYFGK+GMR
Sbjct: 51 LSRTQLHKNRKKRGHVSAGHGRIGKHRKHPAGRGMAGGQHHHRIMMDKYHPGYFGKVGMR 110
Query: 357 NFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPK 536
+FH KN+ CP +N+DKLWTLV + R + A + PVI++ P
Sbjct: 111 HFHKLKNQTVCPTINIDKLWTLVGTEKREECAK-NTSQAPVIDLTDHGIFKLLGKGQLPN 169
Query: 537 QPVIVXXXXXXXXXXXXXXDVGGACVLSA 623
QPV+V +VGGAC+L+A
Sbjct: 170 QPVVVKCRYISKLAEKKIKEVGGACILTA 198
>UniRef50_Q9LR33 Cluster: 60S ribosomal protein L27a-2; n=56;
Eukaryota|Rep: 60S ribosomal protein L27a-2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 146
Score = 118 bits (285), Expect = 9e-26
Identities = 64/148 (43%), Positives = 81/148 (54%), Gaps = 1/148 (0%)
Frame = +3
Query: 183 ATSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNF 362
AT+ KK RK RGHVS NAGG HHHRI DKYHPGYFGK+GMR F
Sbjct: 2 ATALKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF 61
Query: 363 HFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPK-Q 539
H +NK FCP++NLDKLW+LV E + K S+ D VP+I++ + P+ +
Sbjct: 62 HKLRNKFFCPIVNLDKLWSLVPEDVKAK--SSKD-NVPLIDVTQHGFFKVLGKGHLPENK 118
Query: 540 PVIVXXXXXXXXXXXXXXDVGGACVLSA 623
P +V + GGA VL+A
Sbjct: 119 PFVVKAKLISKTAEKKIKEAGGAVVLTA 146
>UniRef50_O62581 Cluster: 60S ribosomal protein L27a; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L27a
- Encephalitozoon cuniculi
Length = 147
Score = 72.1 bits (169), Expect = 1e-11
Identities = 39/142 (27%), Positives = 66/142 (46%)
Frame = +3
Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
KKTRKLRGHVS AGG H + ++HP Y GK GMR +H ++
Sbjct: 6 KKTRKLRGHVSHGYGRVGKHRKHSGGRGLAGGFSHMKTFFTRFHPDYHGKRGMRVYHRKE 65
Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
N ++ ++ +LW ++ ++ R + P+ KVPVI++ + ++P++V
Sbjct: 66 NSDYARPISSARLWGMIPKEQRYDFLDNPE-KVPVIDVREFGYHVVVGGKLSLERPIVVK 124
Query: 555 XXXXXXXXXXXXXDVGGACVLS 620
VGG +++
Sbjct: 125 ARYFTPSAKEEITKVGGKWIIT 146
>UniRef50_Q4P992 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 187
Score = 68.5 bits (160), Expect = 1e-10
Identities = 39/112 (34%), Positives = 53/112 (47%)
Frame = +3
Query: 288 GEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASAPDG 467
G ++ + YFGK+GMR+FH +N +F PV+NLDKLWTLV + R K +A
Sbjct: 77 GSQEMEVDREIGRDSYFGKVGMRHFHLTRNSSFRPVVNLDKLWTLVPAEQR-KGLTADST 135
Query: 468 KVPVINIVKAXXXXXXXXXXXPKQPVIVXXXXXXXXXXXXXXDVGGACVLSA 623
+VPVI+ + A P P IV + GG L A
Sbjct: 136 EVPVIDTLAAGYGKVLGKGRLPALPCIVKARWVSSLAEKKIKEAGGVVKLVA 187
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/48 (50%), Positives = 25/48 (52%)
Frame = +3
Query: 186 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHP 329
T KTRK RGHVS AGG+HHHR NMDKYHP
Sbjct: 3 THLSKTRKHRGHVSAGNGRVGKHRKHPGGRGLAGGQHHHRTNMDKYHP 50
>UniRef50_Q9AW02 Cluster: 60S ribosomal protein L27A; n=3;
Eukaryota|Rep: 60S ribosomal protein L27A - Guillardia
theta (Cryptomonas phi)
Length = 144
Score = 67.7 bits (158), Expect = 2e-10
Identities = 31/76 (40%), Positives = 42/76 (55%)
Frame = +3
Query: 186 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 365
T +++RK RGHVS N+GG+HHH+I +KYH +FGK GMR +
Sbjct: 3 TDIRRSRKKRGHVSSGHGRVGKHRKHPGGRGNSGGQHHHKIFFEKYHKKHFGKTGMRYYR 62
Query: 366 FRKNKNFCPVLNLDKL 413
K NF +NLDK+
Sbjct: 63 KLKQNNFNKSINLDKI 78
>UniRef50_A7QSF4 Cluster: Chromosome chr12 scaffold_159, whole
genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome chr12 scaffold_159, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 151
Score = 57.2 bits (132), Expect = 3e-07
Identities = 21/37 (56%), Positives = 31/37 (83%)
Frame = +3
Query: 315 DKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLV 425
DK+HPG FGK+GMR+FH + K CP++++DKLW++V
Sbjct: 28 DKHHPGNFGKVGMRHFHKLRIKLHCPIVHIDKLWSMV 64
>UniRef50_Q3LW97 Cluster: Ribosomal protein L27a; n=1; Bigelowiella
natans|Rep: Ribosomal protein L27a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 151
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/66 (34%), Positives = 32/66 (48%)
Frame = +3
Query: 186 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFH 365
T KK+RK+RG S +GG+HHH+I ++Y YF K GMR ++
Sbjct: 3 TKLKKSRKMRGKNSSGHGRINKHRKNPGGKGKSGGQHHHKIIFERYRETYFRKTGMRIYN 62
Query: 366 FRKNKN 383
K N
Sbjct: 63 LEKTLN 68
>UniRef50_P53143 Cluster: Putative uncharacterized protein YGL102C;
n=2; Saccharomycetaceae|Rep: Putative uncharacterized
protein YGL102C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 142
Score = 45.2 bits (102), Expect = 0.001
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 1/94 (1%)
Frame = -1
Query: 509 LVVSSFDNIDDGDLAIWSRC-ILQPRLFRD*CPKLI*VQNWTEILVLSKVEISHTKFAKV 333
L V+ ++++ + SR +L +F D CP+ + VQ+W + L VE+SHT ++
Sbjct: 42 LTVTGCQSVNNWSSFLRSRFQVLVSLVFWDQCPQFVQVQDWLPEMSLLLVEVSHTNLTEI 101
Query: 332 SRMVLVHVDXXXXXXXXXXXXXXXXXVLSDTTMS 231
+ MV +HV+ VL+DTT +
Sbjct: 102 TWMVFIHVNSVVMLTTGHTSTTGVLSVLTDTTFT 135
>UniRef50_Q9LPV3 Cluster: Putative 60S ribosomal protein L27a-1;
n=1; Arabidopsis thaliana|Rep: Putative 60S ribosomal
protein L27a-1 - Arabidopsis thaliana (Mouse-ear cress)
Length = 104
Score = 44.4 bits (100), Expect = 0.002
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Frame = +3
Query: 186 TSKKKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGK--LGMRN 359
TS+KKTR LR HVS H R + PG G +GMR
Sbjct: 3 TSRKKTRNLREHVSVG---------------------HGRFGKHRKLPGSRGNAGVGMRY 41
Query: 360 FHFRKNKNFCPVLNLDKLWTLV 425
FH +NK +C ++NLDKLW++V
Sbjct: 42 FHKLRNKFYCQIVNLDKLWSMV 63
>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 60S ribosomal protein L27a - Rattus
norvegicus
Length = 86
Score = 38.3 bits (85), Expect = 0.16
Identities = 20/46 (43%), Positives = 22/46 (47%)
Frame = +3
Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPG 332
+KTRK +GHVS NAGGEH HRIN PG
Sbjct: 6 RKTRKFQGHVSDSHSRISKHHKHRGGQRNAGGEHLHRINCYYKVPG 51
>UniRef50_Q9XYB1 Cluster: PugilistDominant; n=1; Drosophila
melanogaster|Rep: PugilistDominant - Drosophila
melanogaster (Fruit fly)
Length = 179
Score = 35.9 bits (79), Expect = 0.83
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 7 TMVCVCFKIFYHKILVESLIKNIFSDLFYIV*VMMKLLCSIFQIECVVFELYKFLFSCRP 186
+++C F + V S + ++ S LF ++ + LL S+F + +F L LF C+
Sbjct: 111 SVLCSLFSVLXSLFSVLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFSLLSSLFCCKS 170
Query: 187 PQKRR 201
Q+ R
Sbjct: 171 QQRLR 175
>UniRef50_Q6LXD1 Cluster: 50S ribosomal protein L15P; n=9;
Euryarchaeota|Rep: 50S ribosomal protein L15P -
Methanococcus maripaludis
Length = 143
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Frame = +3
Query: 279 NAGGEHHHRINMDKYHPGYFGKLGMRNFHFRKNKNFCPVLNLDKLWTLVSEQTRLKYASA 458
NAG + H +++ K++P YFGK G N+N C + L+ + E+ LKY A
Sbjct: 36 NAGHQKHKWLSVCKFNPDYFGKYGF-------NRNPCLIKQLETINIGELEEYILKYKDA 88
Query: 459 ---PDGKVPV 479
+GKV V
Sbjct: 89 FQVEEGKVVV 98
>UniRef50_A4ANL3 Cluster: Putative lipoprotein; n=1;
Flavobacteriales bacterium HTCC2170|Rep: Putative
lipoprotein - Flavobacteriales bacterium HTCC2170
Length = 535
Score = 33.9 bits (74), Expect = 3.4
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = -2
Query: 613 TQAPPTSLIFFSADFEKNFAFTMTGCLGSLPL 518
T A SL FFS D + N A T GCLG+ P+
Sbjct: 306 TDAEGNSLYFFSLDTKDNSACTSAGCLGAWPV 337
>UniRef50_Q9ZQM0 Cluster: Putative non-LTR retroelement reverse
transcriptase; n=1; Arabidopsis thaliana|Rep: Putative
non-LTR retroelement reverse transcriptase - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1044
Score = 33.1 bits (72), Expect = 5.9
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 314 GQVPSWILWQTWYEKFPL*KEQEFLSSFEL 403
GQ+P WILW W + L EQ+ +SS +L
Sbjct: 842 GQLPIWILWNLWNCRNKLIFEQKHISSMDL 871
>UniRef50_Q8IK87 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1526
Score = 33.1 bits (72), Expect = 5.9
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 147 NTFYLKYTTQQLHHHLNNIK*IGKNIFDKRFH*NFMIKYFETNTNHGSI 1
N+FYL Y + L + LN ++ + +NIFDK+ IKY N+ +
Sbjct: 463 NSFYLPYCDENLLYLLNCVELLCENIFDKKIIIEEKIKYLVGYINNKDV 511
>UniRef50_Q0UL60 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 435
Score = 33.1 bits (72), Expect = 5.9
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Frame = -2
Query: 295 CSPPALPRPPG-CLRCFPIRPCP*LT-*PLSFLVFFFEVACRRTRIYKVRTQHILSEIYY 122
C LP PG C+RC P RP T PL + F+ C RI TQ E+ +
Sbjct: 52 CLGQPLPEYPGVCIRCMPERPSESATQWPLQLRGWVFQELCLSPRIIHFGTQ----EVEW 107
Query: 121 TAASSSLKQYKINRKKY 71
S+ ++ + N K Y
Sbjct: 108 QCRSTYERESRPNLKPY 124
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 605,123,514
Number of Sequences: 1657284
Number of extensions: 12056088
Number of successful extensions: 28129
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 27079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28102
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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