Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e14
         (641 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a pr...   153   7e-37
BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for IM...   153   7e-37
BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a ...   153   7e-37
AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A ...   153   7e-37
BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a ...   146   4e-35
AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a ...   132   8e-31
AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a ...    46   2e-04

>U14968-1|AAA85656.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  153 bits (370), Expect = 7e-37
 Identities = 71/143 (49%), Positives = 87/143 (60%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQPVIV 
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125

Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
                         VGGACVL A
Sbjct: 126 AKFFSRRAEEKIKSVGGACVLVA 148


>BC020169-1|AAH20169.1|  147|Homo sapiens Unknown (protein for
           IMAGE:3543815) protein.
          Length = 147

 Score =  153 bits (370), Expect = 7e-37
 Identities = 71/143 (49%), Positives = 87/143 (60%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 5   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 64

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQPVIV 
Sbjct: 65  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 124

Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
                         VGGACVL A
Sbjct: 125 AKFFSRRAEEKIKSVGGACVLVA 147


>BC005326-1|AAH05326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  153 bits (370), Expect = 7e-37
 Identities = 71/143 (49%), Positives = 87/143 (60%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQPVIV 
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125

Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
                         VGGACVL A
Sbjct: 126 AKFFSRRAEEKIKSVGGACVLVA 148


>AB020236-1|BAA77361.1|  148|Homo sapiens ribosomal protein L27A
           protein.
          Length = 148

 Score =  153 bits (370), Expect = 7e-37
 Identities = 71/143 (49%), Positives = 87/143 (60%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++           PKQPVIV 
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIVK 125

Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
                         VGGACVL A
Sbjct: 126 AKFFSRRAEEKIKSVGGACVLVA 148


>BC066326-1|AAH66326.1|  148|Homo sapiens ribosomal protein L27a
           protein.
          Length = 148

 Score =  146 bits (355), Expect = 4e-35
 Identities = 69/143 (48%), Positives = 86/143 (60%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM++++ ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYNLKR 65

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKAXXXXXXXXXXXPKQPVIVX 554
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++            KQPVIV 
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRSGYYKVLGKGKLAKQPVIVK 125

Query: 555 XXXXXXXXXXXXXDVGGACVLSA 623
                         VGGACVL A
Sbjct: 126 AKLFSRRAEEKIKSVGGACVLVA 148


>AJ400879-2|CAC35388.1|  106|Homo sapiens ribosomal protein L27a
           protein.
          Length = 106

 Score =  132 bits (320), Expect = 8e-31
 Identities = 56/101 (55%), Positives = 72/101 (71%)
 Frame = +3

Query: 195 KKTRKLRGHVSXXXXXXXXXXXXXXXXXNAGGEHHHRINMDKYHPGYFGKLGMRNFHFRK 374
           +KTRKLRGHVS                 NAGG HHHRIN DKYHPGYFGK+GM+++H ++
Sbjct: 6   RKTRKLRGHVSHGHGRIGKHRKHPGGRGNAGGLHHHRINFDKYHPGYFGKVGMKHYHLKR 65

Query: 375 NKNFCPVLNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 497
           N++FCP +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 106


>AB007178-1|BAA25837.1|   34|Homo sapiens ribosomal protein L27a
           protein.
          Length = 34

 Score = 45.6 bits (103), Expect = 2e-04
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +3

Query: 396 LNLDKLWTLVSEQTRLKYASAPDGKVPVINIVKA 497
           +NLDKLWTLVSEQTR+  A    G  P+I++V++
Sbjct: 1   VNLDKLWTLVSEQTRVNAAKNKTGAAPIIDVVRS 34


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,821,593
Number of Sequences: 237096
Number of extensions: 1920092
Number of successful extensions: 3747
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3539
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3740
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)