Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e12
(383 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein. 174 9e-44
BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16 p... 174 9e-44
BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16 p... 174 9e-44
AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16 p... 174 9e-44
AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens ... 71 1e-12
BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein. 52 6e-07
BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal... 41 0.001
BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein. 41 0.001
Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex late... 31 1.3
BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for IM... 31 1.3
BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.3
BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.3
BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein. 31 1.3
AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex pr... 31 1.3
AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex pr... 31 1.3
AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex p... 31 1.3
AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex pr... 31 1.3
AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein pr... 31 1.3
BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for IM... 30 2.9
AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein. 30 2.9
AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein. 30 2.9
M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation fa... 29 5.1
AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein. 29 5.1
S70458-1|AAB30799.1| 56|Homo sapiens cellular adhesion regulat... 28 8.9
S54769-1|AAB25303.1| 82|Homo sapiens cellular adhesion regulat... 28 8.9
>M60854-1|AAA60583.1| 146|Homo sapiens RPS16 protein.
Length = 146
Score = 174 bits (423), Expect = 9e-44
Identities = 80/92 (86%), Positives = 89/92 (96%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+Q
Sbjct: 55 VLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQ 114
Query: 183 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 278
YDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 115 YDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC007977-1|AAH07977.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 174 bits (423), Expect = 9e-44
Identities = 80/92 (86%), Positives = 89/92 (96%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+Q
Sbjct: 55 VLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQ 114
Query: 183 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 278
YDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 115 YDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>BC004324-1|AAH04324.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 174 bits (423), Expect = 9e-44
Identities = 80/92 (86%), Positives = 89/92 (96%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+Q
Sbjct: 55 VLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQ 114
Query: 183 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 278
YDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 115 YDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AB061841-1|BAB79479.1| 146|Homo sapiens ribosomal protein S16
protein.
Length = 146
Score = 174 bits (423), Expect = 9e-44
Identities = 80/92 (86%), Positives = 89/92 (96%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
+LLLGKE+F+ VDIRV VKGGGHVAQ+YAIRQ+ISKAL+A+YQKYVDEASKKEIKDIL+Q
Sbjct: 55 VLLLGKERFAGVDIRVRVKGGGHVAQIYAIRQSISKALVAYYQKYVDEASKKEIKDILIQ 114
Query: 183 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 278
YDR+LLVADPRRCE KKFGGPGARARYQKSYR
Sbjct: 115 YDRTLLVADPRRCESKKFGGPGARARYQKSYR 146
>AK097937-1|BAC85106.1| 178|Homo sapiens protein ( Homo sapiens
cDNA FLJ40618 fis, clone THYMU2013089, moderately
similar to 40S RIBOSOMAL PROTEIN S16. ).
Length = 178
Score = 70.9 bits (166), Expect = 1e-12
Identities = 36/59 (61%), Positives = 44/59 (74%)
Frame = +3
Query: 6 LLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
LLL KE+ + +DI V VKG GHV Q+YA+ Q ISKAL+ Y KYVDEAS +EIKD L +
Sbjct: 67 LLLDKEQLAGMDIHVRVKGSGHVVQIYAVLQYISKALVPCYPKYVDEAS-EEIKDTLTR 124
>BC071674-1|AAH71674.1| 152|Homo sapiens RPS16 protein protein.
Length = 152
Score = 52.0 bits (119), Expect = 6e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAI 104
+LLLGKE+F+ VDIRV VKGGGHVAQ+Y Q +
Sbjct: 55 VLLLGKERFAGVDIRVRVKGGGHVAQIYGESQEL 88
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 121 PSTRNM*TKPQRRKSKTS*YNTIGVCW 201
P TRNM + RR+SKTS + G CW
Sbjct: 126 PITRNMWMRLPRRRSKTSSSSMTGPCW 152
>BC057240-1|AAH57240.1| 396|Homo sapiens mitochondrial ribosomal
protein S9 protein.
Length = 396
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +3
Query: 39 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 218
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 327 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 376
Query: 219 CEPKKFGGPGARARY 263
E KK G GAR ++
Sbjct: 377 RERKKPGQEGARRKF 391
>BC047784-1|AAH47784.1| 302|Homo sapiens MRPS9 protein protein.
Length = 302
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/75 (40%), Positives = 37/75 (49%)
Frame = +3
Query: 39 DIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRR 218
D+ TV GGG AQ AIR A++KAL +F + DE LL DPR
Sbjct: 233 DVTCTVSGGGRSAQAGAIRLAMAKALCSFVTE--DEVEWMR--------QAGLLTTDPRV 282
Query: 219 CEPKKFGGPGARARY 263
E KK G GAR ++
Sbjct: 283 RERKKPGQEGARRKF 297
>Y08982-1|CAA70171.1| 1530|Homo sapiens synaptonemal complex lateral
element protein protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC146798-1|AAI46799.1| 792|Homo sapiens Unknown (protein for
IMAGE:8860302) protein.
Length = 792
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 338 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 381
>BC132870-1|AAI32871.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC132864-1|AAI32865.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>BC040566-1|AAH40566.1| 1024|Homo sapiens SYCP2 protein protein.
Length = 1024
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-3|CAM28338.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL158092-2|CAC36022.2| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-10|CAM28269.1| 1023|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1023
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL109928-9|CAI21795.1| 1530|Homo sapiens synaptonemal complex
protein 2 protein.
Length = 1530
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 339 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 382
>AL080226-1|CAB45780.1| 520|Homo sapiens hypothetical protein
protein.
Length = 520
Score = 31.1 bits (67), Expect = 1.3
Identities = 15/44 (34%), Positives = 26/44 (59%)
Frame = +3
Query: 78 QVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVAD 209
Q+Y+I SK L+ K + SK+E K++L+ +D SL + +
Sbjct: 61 QIYSIEVRESKKLLTIILKNTVKISKREGKELLLYFDASLEITN 104
>BC054882-1|AAH54882.1| 204|Homo sapiens Unknown (protein for
IMAGE:6451327) protein.
Length = 204
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 147 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 230
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-3|CAI16232.1| 689|Homo sapiens novel protein protein.
Length = 689
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 147 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 230
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>AL391827-2|CAI16231.1| 198|Homo sapiens novel protein protein.
Length = 198
Score = 29.9 bits (64), Expect = 2.9
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Frame = +3
Query: 147 ASKKEIKD-ILVQYDRSLLVADPRRCEPK 230
ASKK +K+ +++ YD + DP +C P+
Sbjct: 16 ASKKPLKEKVVLMYDEIFMTEDPSKCSPR 44
>M62302-2|AAA58501.1| 372|Homo sapiens growth/differentiation
factor 1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 171 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 311
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>AC003972-2|AAB94786.1| 372|Homo sapiens GDF-1 protein.
Length = 372
Score = 29.1 bits (62), Expect = 5.1
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = +3
Query: 171 ILVQYDRSLL--VADPRR-CEPKKFGGPGARARYQKSYR*AFKKTIGWYR 311
+LV D L +A PRR EP GGPG R ++ Y +F++ +GW+R
Sbjct: 236 LLVTLDPRLCHPLARPRRDAEPVLGGGPGGACRARRLYV-SFRE-VGWHR 283
>S70458-1|AAB30799.1| 56|Homo sapiens cellular adhesion regulatory
molecule protein.
Length = 56
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 298 SGGIVAASCCHCDIIGWCTIK 360
SGG+ A CCH D WC ++
Sbjct: 12 SGGLTTAPCCHVD---WCKLR 29
>S54769-1|AAB25303.1| 82|Homo sapiens cellular adhesion regulatory
molecule protein.
Length = 82
Score = 28.3 bits (60), Expect = 8.9
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +1
Query: 298 SGGIVAASCCHCDIIGWCTIK 360
SGG+ A CCH D WC ++
Sbjct: 38 SGGLTTAPCCHVD---WCKLR 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,064,566
Number of Sequences: 237096
Number of extensions: 1049404
Number of successful extensions: 2253
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2251
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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