Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e12
(383 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical pr... 150 3e-37
Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical pr... 31 0.28
U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical p... 28 2.6
U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical pr... 28 2.6
L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical pr... 28 2.6
AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical... 28 2.6
U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical pr... 27 3.4
AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical ... 27 3.4
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 26 7.9
U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical pr... 26 7.9
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 26 7.9
>Z78413-6|CAB01658.1| 144|Caenorhabditis elegans Hypothetical
protein T01C3.6 protein.
Length = 144
Score = 150 bits (364), Expect = 3e-37
Identities = 67/92 (72%), Positives = 81/92 (88%)
Frame = +3
Query: 3 ILLLGKEKFSMVDIRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQ 182
+LL+GKE+F VDIR+ V GGGHVAQ+YA+RQA++KAL+A+Y KYVDE SK+E+K+I
Sbjct: 53 LLLVGKERFQDVDIRIRVSGGGHVAQIYAVRQALAKALVAYYHKYVDEQSKRELKNIFAA 112
Query: 183 YDRSLLVADPRRCEPKKFGGPGARARYQKSYR 278
YD+SLLVADPRR E KKFGGPGARARYQKSYR
Sbjct: 113 YDKSLLVADPRRRESKKFGGPGARARYQKSYR 144
>Z93372-4|CAB07546.1| 301|Caenorhabditis elegans Hypothetical
protein BE10.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.28
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +3
Query: 135 YVDEASKKEIKDILVQYDRSLLVADPRRCE 224
+ DE +KE+ D+ QYDRS+ + D R E
Sbjct: 151 FCDEVQQKEVGDLFHQYDRSIEIIDKVRHE 180
>U23525-10|AAC46571.2| 503|Caenorhabditis elegans Hypothetical
protein K11G12.6a protein.
Length = 503
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 8 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 127
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 399 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 438
>U23525-9|ABC71820.1| 766|Caenorhabditis elegans Hypothetical
protein K11G12.6b protein.
Length = 766
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 8 FARQGKILYG*HQSDSQGWWSCSTSLRYQTSYFKGSDRLL 127
FAR +Y + WW+ S Y ++ KG+D LL
Sbjct: 662 FARAKLYMYHFTDIGDKNWWTRSFQEEYMPTFNKGNDALL 701
>L11247-4|AAK84520.1| 392|Caenorhabditis elegans Hypothetical
protein F09G8.3 protein.
Length = 392
Score = 27.9 bits (59), Expect = 2.6
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = +3
Query: 195 LLVADPRRCEPKKFGGPGARARY 263
LL DPR+ E K PGARA++
Sbjct: 365 LLTLDPRKNERSKVNQPGARAKW 387
>AL023835-15|CAA19492.2| 520|Caenorhabditis elegans Hypothetical
protein Y37A1B.9 protein.
Length = 520
Score = 27.9 bits (59), Expect = 2.6
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = +2
Query: 14 RQGKILYG*HQSDSQ---GWWSCSTSLRYQTSYFKGSDRLLPEIC 139
R+ +I+ H + GW S L Y+T+Y + L P+ C
Sbjct: 259 RENEIIINIHDNPEMTRLGWTSLEYKLGYRTTYIMNLENLHPDFC 303
>U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical
protein C42D4.2 protein.
Length = 500
Score = 27.5 bits (58), Expect = 3.4
Identities = 14/56 (25%), Positives = 28/56 (50%)
Frame = +3
Query: 63 GGHVAQVYAIRQAISKALIAFYQKYVDEASKKEIKDILVQYDRSLLVADPRRCEPK 230
GG VA + + ++ L + +Q+Y+ +S + +Q +R+ A+ C PK
Sbjct: 129 GGTVASMLSFSTKVNTDL-SLFQQYISMSSPTNFDTLELQVERTYRFAEHANCLPK 183
>AC006663-2|AAF39900.2| 603|Caenorhabditis elegans Hypothetical
protein H24K24.4 protein.
Length = 603
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 283 PSRKPSGGIVAASCCHCDIIGWCTIKNIKS*KK 381
P+ + G I+ CC IG C +KNI+ +K
Sbjct: 430 PAPEDPGTILLDICCGTGTIGQCLLKNIQKSQK 462
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 68 TTTLDCHSDVNHREFFLAEQKD 3
TT LDC + H EF+ AE D
Sbjct: 146 TTFLDCLMEQTHPEFYRAEDAD 167
>U42834-4|AAA83584.1| 2229|Caenorhabditis elegans Hypothetical protein
F28B4.3 protein.
Length = 2229
Score = 26.2 bits (55), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 42 IRVTVKGGGHVAQVYAIRQAISKALIAFYQKYVDEA 149
I++TV G G QVY +++AL FY Y ++
Sbjct: 1138 IQLTVFGYGTTIQVYNGNGVLAEALELFYDDYTGQS 1173
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 26.2 bits (55), Expect = 7.9
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -1
Query: 68 TTTLDCHSDVNHREFFLAEQKD 3
TT LDC + H EF+ AE D
Sbjct: 21 TTFLDCLMEQTHPEFYRAEDAD 42
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,398,494
Number of Sequences: 27780
Number of extensions: 148623
Number of successful extensions: 387
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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