Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e07
         (641 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061358-1|AAL28906.1|  319|Drosophila melanogaster LD28544p pro...   131   7e-31
AE013599-3837|AAF47180.1|  319|Drosophila melanogaster CG3362-PA...   131   7e-31
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    31   1.3  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    31   1.3  
BT021960-1|AAX94781.1| 1200|Drosophila melanogaster LD12755p pro...    28   9.4  
AE014297-1880|AAF55083.1| 1200|Drosophila melanogaster CG7832-PA...    28   9.4  

>AY061358-1|AAL28906.1|  319|Drosophila melanogaster LD28544p
           protein.
          Length = 319

 Score =  131 bits (317), Expect = 7e-31
 Identities = 60/160 (37%), Positives = 98/160 (61%)
 Frame = +3

Query: 162 RLQEIPEFNRENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTS 341
           RLQ+IP   +++  +RD  E+   +N  + GG  ++QIV+DFD+T+T+   ++G +V +S
Sbjct: 15  RLQDIPALTQDHCRMRDPAEVERIINEFVIGGPERMQIVSDFDYTITKQRTEDGGAVPSS 74

Query: 342 FGMFRECPSIPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFP 521
           FG+F  C S+P+++K E  +L   Y+PIE DP M + EK ++M++W+  +  L  G  F 
Sbjct: 75  FGIFNACQSLPENFKAETDKLYHKYRPIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFD 134

Query: 522 RSELTHVANKMIDSFRKGVKELIIWSQTHEVPVLVFSAGL 641
           +SE+  +A+K   + R    E     Q   +P LVFSAGL
Sbjct: 135 QSEIDQIASKYTHALRDRTHEFFADLQRLGIPTLVFSAGL 174


>AE013599-3837|AAF47180.1|  319|Drosophila melanogaster CG3362-PA
           protein.
          Length = 319

 Score =  131 bits (317), Expect = 7e-31
 Identities = 60/160 (37%), Positives = 98/160 (61%)
 Frame = +3

Query: 162 RLQEIPEFNRENIHIRDETELVAKLNRIIKGGHNKLQIVTDFDHTLTRHTLDNGKSVLTS 341
           RLQ+IP   +++  +RD  E+   +N  + GG  ++QIV+DFD+T+T+   ++G +V +S
Sbjct: 15  RLQDIPALTQDHCRMRDPAEVERIINEFVIGGPERMQIVSDFDYTITKQRTEDGGAVPSS 74

Query: 342 FGMFRECPSIPQHYKDEDVRLASIYKPIEADPVMTVEEKTKHMVDWYIAAHALLKGVQFP 521
           FG+F  C S+P+++K E  +L   Y+PIE DP M + EK ++M++W+  +  L  G  F 
Sbjct: 75  FGIFNACQSLPENFKAETDKLYHKYRPIEIDPHMPIAEKVQYMIEWWTKSGELTSGFPFD 134

Query: 522 RSELTHVANKMIDSFRKGVKELIIWSQTHEVPVLVFSAGL 641
           +SE+  +A+K   + R    E     Q   +P LVFSAGL
Sbjct: 135 QSEIDQIASKYTHALRDRTHEFFADLQRLGIPTLVFSAGL 174


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
            initiation factoreIF4G protein.
          Length = 1666

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +3

Query: 378  HYKDEDVRLASIYKPIEADPVMT--VEEKTKHMVDWYIAAHALLKGVQFPRSELTHVANK 551
            HYKD   +L S        PV+   ++    H ++       L+ G++ PR  L+ +  +
Sbjct: 1562 HYKDNSYKLESETFQKFCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPRGLLSELIGE 1621

Query: 552  MIDSFRKGVKELIIWSQTHE 611
            + D+F    + L  W  + +
Sbjct: 1622 LYDAFVIQKESLCKWRDSKD 1641


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
            protein.
          Length = 1345

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
 Frame = +3

Query: 378  HYKDEDVRLASIYKPIEADPVMT--VEEKTKHMVDWYIAAHALLKGVQFPRSELTHVANK 551
            HYKD   +L S        PV+   ++    H ++       L+ G++ PR  L+ +  +
Sbjct: 1241 HYKDNSYKLESETFQKFCIPVLQRYIDSNEDHQLECLYTLQLLVHGLEHPRGLLSELIGE 1300

Query: 552  MIDSFRKGVKELIIWSQTHE 611
            + D+F    + L  W  + +
Sbjct: 1301 LYDAFVIQKESLCKWRDSKD 1320


>BT021960-1|AAX94781.1| 1200|Drosophila melanogaster LD12755p
           protein.
          Length = 1200

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 546 NKMIDSFRKGVKELIIWSQTHEVPVLVFSAG 638
           N  ++S +K V +   ++QTH  P++VF+ G
Sbjct: 324 NNNVESLKKPVVQGTSYNQTHPPPLMVFNTG 354


>AE014297-1880|AAF55083.1| 1200|Drosophila melanogaster CG7832-PA
           protein.
          Length = 1200

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/31 (35%), Positives = 20/31 (64%)
 Frame = +3

Query: 546 NKMIDSFRKGVKELIIWSQTHEVPVLVFSAG 638
           N  ++S +K V +   ++QTH  P++VF+ G
Sbjct: 324 NNNVESLKKPVVQGTSYNQTHPPPLMVFNTG 354


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,391,593
Number of Sequences: 53049
Number of extensions: 616154
Number of successful extensions: 1606
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1606
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)