Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e06
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.1  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   1.9  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   1.9  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   1.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   4.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.3  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    22   4.3  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          22   4.3  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    22   4.3  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    22   4.3  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 520 SGVLCSYYTPIFDTYPISLQPYF 452
           +G LC+ Y P+    P+ L P F
Sbjct: 167 AGFLCNNYLPLPQVPPLPLPPIF 189


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 520 SGVLCSYYTPIFDTYPISLQPYF 452
           +G LC+ Y P+    P+ L P F
Sbjct: 167 TGFLCNNYPPLPQVPPLPLPPIF 189


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 475  DKYQKLGCNMSIKLHFLDSHVDFFPDN 555
            DKY +L  N S +  F+   VDF   N
Sbjct: 1909 DKYSRLVNNPSARRRFIAHVVDFIETN 1935


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 8   IYFLNFFLLIYKISMLLVRVGQYSTRQALRSK 103
           IY  N F L +    LLV V  +S  Q   +K
Sbjct: 316 IYTFNLFYLCFCFYWLLVMVAMFSRTQQSANK 347


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 8   IYFLNFFLLIYKISMLLVRVGQYSTRQALRSK 103
           IY  N F L +    LLV V  +S  Q   +K
Sbjct: 272 IYTFNLFYLCFCFYWLLVMVAMFSRTQQSANK 303


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 574 LYCNHQDYQEKSPHVNLESGV 512
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 6/18 (33%), Positives = 13/18 (72%)
 Frame = +1

Query: 436 KHPDYKNKVANLLDKYQK 489
           +H +  NK+ NL+D++ +
Sbjct: 211 EHQNLHNKICNLIDEFNE 228


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 565 NHQDYQEKSPHVNLESGVLCSYY 497
           N+Q  Q  S + N + G  C YY
Sbjct: 214 NYQYNQAYSNYNNYQEGFSCQYY 236


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -1

Query: 565 NHQDYQEKSPHVNLESGVLCSYY 497
           N+Q  Q  S + N + G  C YY
Sbjct: 234 NYQYNQAYSNYNNYQEGFSCQYY 256


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 574 LYCNHQDYQEKSPHVNLESGV 512
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -1

Query: 574 LYCNHQDYQEKSPHVNLESGV 512
           +Y +HQ   + +P +N E+G+
Sbjct: 63  VYYHHQTIPQDNPIINTETGL 83


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,724
Number of Sequences: 336
Number of extensions: 2985
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)