Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6e06
         (577 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical pr...    29   1.8  
CU457740-2|CAM36332.1|  301|Caenorhabditis elegans Hypothetical ...    29   3.1  
Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical ...    27   7.2  
AF016429-3|AAB65366.1|  383|Caenorhabditis elegans Hypothetical ...    27   7.2  
AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical...    27   7.2  
AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical ...    27   9.5  
AF068709-4|AAC19253.2|  297|Caenorhabditis elegans Serpentine re...    27   9.5  

>U40160-1|AAA81155.3|  531|Caenorhabditis elegans Hypothetical
           protein C56E10.3 protein.
          Length = 531

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 17/58 (29%), Positives = 27/58 (46%)
 Frame = +1

Query: 229 KALDKNNATFEYLCKKIPRLSDAKIKGVFDGPQIRSLMADEEFDATMNNTESDAWLAF 402
           K LDK    +E LCKK  +L   K +   +  Q+ +    +E D +    E +A  +F
Sbjct: 43  KQLDKKCGEYEQLCKKTAKLKAEKSRLDVESTQLTA--QSDEIDQSFTKVEQNAEASF 98


>CU457740-2|CAM36332.1|  301|Caenorhabditis elegans Hypothetical
           protein C50E10.2 protein.
          Length = 301

 Score = 28.7 bits (61), Expect = 3.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +1

Query: 190 PLHIKLGMMKQFVKALDKNNATFEYLCKKIPRLSDAKIKGV 312
           P  + + + +Q  + L KN+   EY+C  +    DAK   V
Sbjct: 188 PYILTISLKRQLFEELKKNHGDLEYVCNMLIVAEDAKFPNV 228


>Z81464-7|CAB03857.2|  338|Caenorhabditis elegans Hypothetical
           protein C08E8.2 protein.
          Length = 338

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
 Frame = +1

Query: 118 VKISX*KQKTLQKNLISPEKILLPP-----LHIKLGMMKQFVKALDKNNATFEYLCKKIP 282
           +KIS    K L KNL  P  I L P     +  +  M +  +K LD      +  C+ +P
Sbjct: 166 LKISTGTVKVLAKNLYFPNGIQLTPDKKSAIFAECSMAR--IKKLDLETGKIDIFCENLP 223

Query: 283 RLSDAKIKG 309
            L D  I+G
Sbjct: 224 GLPD-NIRG 231


>AL110478-4|CAB54346.1|  546|Caenorhabditis elegans Hypothetical
           protein Y26D4A.10 protein.
          Length = 546

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +1

Query: 463 ANLLDKYQKLGCNMSIKLHFLDSHVDFFPDNLGDYSKE 576
           A++L+K  +   +   K+H  D H +F   N  DY  E
Sbjct: 491 ADILEKRARALEDQKCKIHPTDDHTNFSRSNFSDYPNE 528


>AF016429-3|AAB65366.1|  383|Caenorhabditis elegans Hypothetical
           protein T21H3.5 protein.
          Length = 383

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
 Frame = -2

Query: 348 ISHQRSDLRSIEHSFNFCIR*SWNFFTQVFKSSIVFIQCF--NKLFHHTEFDMK 193
           +SH+   ++   H F++ +   W+F   VF  +I +I CF  + +FH  +F MK
Sbjct: 175 VSHRDVVMKLSGHDFSYFVV-DWSFSLLVFTFTIPYITCFIVSLVFH--KFYMK 225


>AC090999-22|AAK26159.1|  481|Caenorhabditis elegans Hypothetical
           protein Y82E9BR.17a protein.
          Length = 481

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 9/56 (16%)
 Frame = +1

Query: 403 RDVVNNFLGNNKHPDYKNKVANLLDKY---------QKLGCNMSIKLHFLDSHVDF 543
           + ++ NF      P    +V N ++++         +K+ C M++KL + D H DF
Sbjct: 116 KQILGNFWKTYSEPRIAEEVLNTIERFCVITMGRYVRKILCYMNVKLDWFDFHFDF 171


>AF078157-5|AAN84817.1|  379|Caenorhabditis elegans Hypothetical
           protein F25E5.7 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 19/74 (25%), Positives = 33/74 (44%)
 Frame = +1

Query: 349 EEFDATMNNTESDAWLAFRDVVNNFLGNNKHPDYKNKVANLLDKYQKLGCNMSIKLHFLD 528
           + FD  M+ ++ D    F+D+V   +  N  PD  +    +L+  + L  N SI    + 
Sbjct: 128 DRFDIIMDRSKFDMTRKFQDLVRRVIVINGCPDVNSAKVLILELKKPLELNPSIWPVCIS 187

Query: 529 SHVDFFPDNLGDYS 570
           +    F D   D+S
Sbjct: 188 NDPQLF-DRSSDFS 200


>AF068709-4|AAC19253.2|  297|Caenorhabditis elegans Serpentine
           receptor, class t protein26 protein.
          Length = 297

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 146 VFCFYXEIFTRIPLFLNVVLVSCYTVPHAQEAWK 45
           V CF  +IF  I + +N V+V  + +  AQ  W+
Sbjct: 224 VICFINQIFASIYVVMNFVMVPEWMIVLAQLLWQ 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,040,078
Number of Sequences: 27780
Number of extensions: 271678
Number of successful extensions: 902
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 902
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)