Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e05
(142 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 26 0.047
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 26 0.047
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 1.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 20 2.3
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 20 2.3
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 3.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 19 4.1
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 19 4.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 19 4.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 19 7.2
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 19 7.2
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 19 7.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 19 7.2
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 18 9.5
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.047
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHSKKK 142
Y YS++ + NNY N+ N + ++ KK
Sbjct: 89 YKYSNYNNYNNNYNNNYNNNYNNNYKK 115
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 116 YLNYFNNYSQMI*NLSNN 63
Y NY NNY+ N NN
Sbjct: 94 YNNYNNNYNNNYNNNYNN 111
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.047
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHSKKK 142
Y YS++ + NNY N+ N + ++ KK
Sbjct: 89 YKYSNYNNYNNNYNNNYNNNYNNNYKK 115
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = -3
Query: 116 YLNYFNNYSQMI*NLSNN 63
Y NY NNY+ N NN
Sbjct: 94 YNNYNNNYNNNYNNNYNN 111
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 1.8
Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +2
Query: 62 YCYSSFKSSVNNY--*NSLNKTHQHSKKK 142
Y YS++ + NNY N+ N + ++ KK
Sbjct: 322 YKYSNYNNYNNNYNNYNNYNNNYNNNYKK 350
Score = 20.6 bits (41), Expect = 1.8
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 116 YLNYFNNYSQMI*NLSNN 63
Y N +NNY+ N +NN
Sbjct: 330 YNNNYNNYNNYNNNYNNN 347
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 20.2 bits (40), Expect = 2.3
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNK 118
Y YS++ + NNY N+ NK
Sbjct: 89 YNYSNYNNYNNNY-NNYNK 106
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.2 bits (40), Expect = 2.3
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 38 CIFANIVFYCYSSFKS 85
C+F N F YSS S
Sbjct: 336 CLFYNTDFIIYSSLSS 351
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.8 bits (39), Expect = 3.1
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = -3
Query: 140 FFLSVDVFYLNYFNNYSQMI 81
FFL+++VFY + + S+ I
Sbjct: 434 FFLAINVFYWFAYLSRSERI 453
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 107 YFNNYSQMI*NLSNN 63
++NN++ I ++SNN
Sbjct: 530 FYNNFNSDIKSISNN 544
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 19.4 bits (38), Expect = 4.1
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 38 CIFANIVFYCYSSFKSSVNNY*NSLNK 118
CI ++ Y YS S V N+ +L +
Sbjct: 221 CIPMILIIYYYSQIVSHVVNHEKALRE 247
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 19.4 bits (38), Expect = 4.1
Identities = 6/15 (40%), Positives = 12/15 (80%)
Frame = -3
Query: 107 YFNNYSQMI*NLSNN 63
++NN++ I ++SNN
Sbjct: 530 FYNNFNSDIKSISNN 544
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 62 YCYSSFKSSVNNY*NSLNKTHQHS 133
Y YS++ + NNY + K ++
Sbjct: 89 YKYSNYNNYNNNYNTNYKKLQYYN 112
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 18.6 bits (36), Expect = 7.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 101 NNYSQMI*NLSNNRIQC*QIYIKIS 27
NNY I N +NN ++Y I+
Sbjct: 87 NNYISNISNYNNNNNYNKKLYYNIN 111
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 18.6 bits (36), Expect = 7.2
Identities = 7/18 (38%), Positives = 13/18 (72%)
Frame = -3
Query: 116 YLNYFNNYSQMI*NLSNN 63
Y + +NY+++I +SNN
Sbjct: 25 YDDLLSNYNRLIRPVSNN 42
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 18.6 bits (36), Expect = 7.2
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -3
Query: 101 NNYSQMI*NLSNNRIQC*QIYIKIS 27
NNY I N +NN ++Y I+
Sbjct: 325 NNYISNISNYNNNNNYNKKLYYNIN 349
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 18.2 bits (35), Expect = 9.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3
Query: 137 FLSVDVFYL 111
FLSV VFYL
Sbjct: 252 FLSVLVFYL 260
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,771
Number of Sequences: 438
Number of extensions: 381
Number of successful extensions: 23
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 146,343
effective HSP length: 27
effective length of database: 134,517
effective search space used: 2555823
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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