Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e01
(521 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces p... 31 0.14
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 30 0.24
SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2 |Schizosacch... 29 0.32
SPBC16H5.06 |rip1||ubiquinol-cytochrome-c reductase complex subu... 28 0.97
SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomy... 27 1.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 27 1.7
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 3.0
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 3.0
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 3.0
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 3.0
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 3.0
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 3.0
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 3.0
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 3.0
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 3.0
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 3.0
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 3.0
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 26 3.9
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 26 3.9
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 25 5.2
SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|ch... 25 6.8
SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|... 25 6.8
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi... 25 9.0
SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|ch... 25 9.0
SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3' ss-tail|S... 25 9.0
SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein Rrp12|Sch... 25 9.0
>SPAC7D4.10 |vma13||V-type ATPase subunit H|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 450
Score = 30.7 bits (66), Expect = 0.14
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
Frame = +3
Query: 198 STQKNPPPVP--NEEVS-LINHLVLEYLEWNGYLYTAAVMASEANTVEKRTRADLCAEVG 368
S +PPPV N +V +IN++ + W GY + ++ +E +E T L A V
Sbjct: 9 SNAASPPPVELDNSQVDEIINNVRCVAIPWQGYQRSGSLEENELQEIENLTGKPLSAYVK 68
Query: 369 VKDDEKSS 392
+++ ++
Sbjct: 69 TAEEDTTA 76
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 29.9 bits (64), Expect = 0.24
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 433 SVYAVTTFDSSGKVEDFSSSLTPTSAHRSALVLFST 326
S+ TT +SG V FSSS +PTS+ L S+
Sbjct: 515 SIIVPTTVSTSGSVSSFSSSPSPTSSFSGTSALSSS 550
>SPBC947.02 |apl2||AP-1 adaptor complex subunit Apl2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 683
Score = 29.5 bits (63), Expect = 0.32
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +3
Query: 264 EYLEWNGYLYTAAVMASEANTVEKRTRADLCAEVGVKDDEKSSTLPLLSNVVTAYTDRIK 443
EY NG++ + S+ N V AE+ +D EK NVV TDR+
Sbjct: 158 EYCASNGFIEQLQALVSDPNPVVVANAVRSLAEIHDQDPEKG-----YFNVVYTMTDRLM 212
Query: 444 RKINKCKK 467
+++C +
Sbjct: 213 VALSECNE 220
>SPBC16H5.06 |rip1||ubiquinol-cytochrome-c reductase complex subunit
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 228
Score = 27.9 bits (59), Expect = 0.97
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = -2
Query: 424 AVTTFDSSGKVEDFSSSLTPTSAHRSALVLFSTVLASEAMTAA 296
++ T+ S ++ DFS T ++ RS ++ ++ V A+TAA
Sbjct: 40 SIRTYTDSPEMPDFSEYQTKSTGDRSRVISYAMVGTMGALTAA 82
>SPCC18B5.05c |||phosphomethylpyrimidine kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 327
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = -3
Query: 162 LVPRLTVYSSIHPFSIVLLSQSTSPSQKTIYSHSF*NNNMFQYNLLGPKFILM 4
L P L VY+S + +L+ ++ S + S N M + LGPKF+++
Sbjct: 139 LFPHLLVYASNVMEAFILVEKTLKKSPPPLKSFPDIQNLMSIIHRLGPKFVVL 191
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 27.1 bits (57), Expect = 1.7
Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Frame = +3
Query: 60 MNENKSFSEKEMLIVIKELLKRDGYLNKLSAEVRAKVTEILQERQNSTQKNPPPVPNEEV 239
M+ K E + + EL+ L++ E+ ++ +ER+ + N N+E+
Sbjct: 703 MSNEKQALELKYSSLKNELINAQNLLDRREEELSELSKKLFEERKIRSGSNDDIEKNKEI 762
Query: 240 SLIN-----------HLVLEYLEWNGYLYTAAVMASEANTVEKRTRADLCAEVGVKDDEK 386
+++N HL + +E + ++ EAN E + LC +G D
Sbjct: 763 NVLNSELADKLAQIRHLESDKMELDKLVHHLNRGIEEANIEENAVKKRLCLLMGC-DYSS 821
Query: 387 SSTLPLLSNV 416
S L ++S +
Sbjct: 822 VSILQIVSQI 831
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 3.0
Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YYYFKMNE---NKSFSEKEMLIVIKELLKRDGYL 137
YY KM++ N S S+KEML +IK L YL
Sbjct: 737 YYSAKMSKAQLNYSVSDKEMLAIIKSLKHWRHYL 770
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 25.8 bits (54), Expect = 3.9
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +3
Query: 201 TQKNPPPVPNEEVSLINHLVLEYL 272
T+K PP+P+E VS ++ +++L
Sbjct: 1048 TEKKAPPIPSELVSQVSPEAIQFL 1071
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 25.8 bits (54), Expect = 3.9
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 246 INHLVLEYLEWNGYLYTAAVMASEAN 323
+N +VL+YL GY T A++ EA+
Sbjct: 12 LNRIVLDYLAKKGYSRTEAMLRLEAS 37
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.4 bits (53), Expect = 5.2
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 152 G*QFIQVSIPFQ*FFYHNQHLLLRKRFILIHFEIIICFSTIYLDQN 15
G QF + P+ + N+ LL +K FI IH+E++ + I + Q+
Sbjct: 2301 GCQFENIICPYFNHEFSNEQLLQQK-FIRIHWEVLEAVAGIQVIQH 2345
>SPCC777.02 |||transcription factor |Schizosaccharomyces pombe|chr
3|||Manual
Length = 632
Score = 25.0 bits (52), Expect = 6.8
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 164 KSH*NSTRETKQYTEKSTPRPE*RSLIDQPFSLRVFGVEWIFIYCSCHGFGS 319
K H +++ K E++ +SL+D P SL V G + Y FG+
Sbjct: 103 KDHLSASLPNKTSYEQADTNATSKSLVDLPVSLEVRGRNTVTFYGPTSIFGT 154
>SPBC3H7.06c |pof9||F-box protein Paf9|Schizosaccharomyces pombe|chr
2|||Manual
Length = 467
Score = 25.0 bits (52), Expect = 6.8
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 257 SLRVFGVEWIFIYCSCHGFGSQHCREE 337
S+ +GVE YC C G GS H +E+
Sbjct: 357 SIWSWGVE--LRYCGCLGLGSLHLQEQ 381
>SPBC15D4.14 |taf73||TATA-binding protein associated factor
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 246 INHLVLEYLEWNGYLYTAAVMASEANTV 329
+N +VL+YL GY T A++ E ++V
Sbjct: 15 LNKIVLDYLFKKGYSRTEAMLRLEISSV 42
>SPCC576.17c |||membrane transporter|Schizosaccharomyces pombe|chr
3|||Manual
Length = 525
Score = 24.6 bits (51), Expect = 9.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3
Query: 348 LLWSSSLQCWLPK 310
LLW LQCWL K
Sbjct: 360 LLWFEPLQCWLYK 372
>SPCC1322.01 ||SPCC23B6.06|3'-5' exonuclease for RNA 3'
ss-tail|Schizosaccharomyces pombe|chr 3|||Manual
Length = 957
Score = 24.6 bits (51), Expect = 9.0
Identities = 18/80 (22%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Frame = +3
Query: 192 QNSTQKNPPPVPNEEVSLINHLVLEYLEWNGYLYTAAVMASEANTVEKRTRADLC---AE 362
Q S K P+ EE+ + + + + E+ L V A +++ LC E
Sbjct: 368 QVSRDKYKLPISTEEIKPVVYSQVTWTEFEKKLLRYLVQEMIAKSIQSLPNTHLCQVYKE 427
Query: 363 VGVKDDEKSSTLPLLSNVVT 422
VG++ E+ T + +T
Sbjct: 428 VGLQTHERGLTSDQFAKFLT 447
>SPBC1105.01 |rrp12|SPBPB7E8.03|rRNA processing protein
Rrp12|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1001
Score = 24.6 bits (51), Expect = 9.0
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +3
Query: 27 VNCTETYYYFKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEVRAKVTEI-LQERQNST 203
+NCT+ + NE+K K + +V+ L+ K S ++R KV +I +Q Q
Sbjct: 114 LNCTQEFLLSFSNESKELYLKAVDVVMPLLV-------KFSVDLRPKVRKISIQVLQTLK 166
Query: 204 QKNPPPVPNEEVSLINHL 257
QK +P+ ++ + L
Sbjct: 167 QKYDGLLPHLYPAIFDEL 184
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,288,619
Number of Sequences: 5004
Number of extensions: 47708
Number of successful extensions: 178
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 178
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 212331630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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