Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e01
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0012 + 95823-95909,96449-96581,96899-96987,97088-97210,979... 39 0.003
11_01_0012 + 100013-100099,100640-100772,101090-101178,101279-10... 39 0.003
09_01_0173 + 2495864-2496312,2497420-2497457,2497915-2498123,249... 31 0.74
03_03_0248 + 15819264-15819460,15820691-15820729,15820797-158209... 29 1.7
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 29 3.0
08_02_1600 + 28133818-28133900,28134240-28134345,28135169-281352... 28 5.2
05_04_0164 + 18658203-18658529 28 5.2
03_05_0697 + 26888791-26888861,26890468-26890579,26891561-268917... 28 5.2
04_03_0521 + 16765347-16767324,16769202-16769392 27 6.9
05_03_0376 - 13252220-13252354,13252433-13252541,13253279-132533... 27 9.1
04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203 27 9.1
02_05_0684 - 30880527-30880753,30881952-30882124,30882687-308827... 27 9.1
01_05_0417 - 21961780-21962157 27 9.1
>12_01_0012 +
95823-95909,96449-96581,96899-96987,97088-97210,
97980-98119,98207-98232,98310-98572
Length = 286
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Frame = +3
Query: 90 EMLIVIKELLKRDGYLNKLSAEVRAKVTEILQER----QNSTQKNPPPVP--NEEVS--- 242
E+ ++ L++ G L K+ AE+RA V E ++E +N NP + N+
Sbjct: 10 ELKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVVENDDGGNPALLGSCNDRAKQLH 69
Query: 243 ------LINHLVLEYLEWNGYLYTAAVMASEANTVE---KRTRADLCAEVGVKDDEKSST 395
L+ LV EYLEW +T V E N + K D + G + + +
Sbjct: 70 ASPSGRLLTALVSEYLEWAQLSHTMKVYLPECNLPKDFWKNELKDFSNKSGAEGSRSAES 129
Query: 396 LPLLSNVVTAY 428
P+L +V+ Y
Sbjct: 130 GPMLLDVLEGY 140
>11_01_0012 +
100013-100099,100640-100772,101090-101178,101279-101401,
102171-102310,102398-102423,102501-102763
Length = 286
Score = 38.7 bits (86), Expect = 0.003
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 18/131 (13%)
Frame = +3
Query: 90 EMLIVIKELLKRDGYLNKLSAEVRAKVTEILQER----QNSTQKNPPPVP--NEEVS--- 242
E+ ++ L++ G L K+ AE+RA V E ++E +N NP + N+
Sbjct: 10 ELKTLVTRTLEKKGVLAKIRAELRASVFEAIEEEDRVVENDDGGNPALLGSCNDRAKQLH 69
Query: 243 ------LINHLVLEYLEWNGYLYTAAVMASEANTVE---KRTRADLCAEVGVKDDEKSST 395
L+ LV EYLEW +T V E N + K D + G + + +
Sbjct: 70 ASPSGRLLTALVSEYLEWAQLSHTMKVYLPECNLPKDFWKNELKDFSNKSGAEGSRSAES 129
Query: 396 LPLLSNVVTAY 428
P+L +V+ Y
Sbjct: 130 GPMLLDVLEGY 140
>09_01_0173 +
2495864-2496312,2497420-2497457,2497915-2498123,
2498894-2499205
Length = 335
Score = 30.7 bits (66), Expect = 0.74
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +3
Query: 90 EMLIVIKELLKRDGYLNKLSAEVRAKVTEILQERQNSTQKNPPPVPNEEVSLIN 251
E+ +KE L + S+E RA+V E++ + + +NP P P E ++L+N
Sbjct: 94 ELKAKLKEALYGTERGLRASSETRAEVVELITQLE---ARNPTPAPTEALTLLN 144
>03_03_0248 +
15819264-15819460,15820691-15820729,15820797-15820936,
15821150-15821225,15822866-15823160,15823236-15823342,
15823442-15823489,15823568-15823853,15823954-15823961,
15824083-15824184,15824426-15824553,15824664-15824741,
15825047-15825145,15825247-15825302
Length = 552
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 108 KELLKRDGYLNKLSAEVRAKVTEILQERQNSTQKN 212
KE++K D + KLS R KV++I +ER+ ++
Sbjct: 240 KEIIKGDPSIKKLSRRERRKVSQIEREREREAARS 274
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 303 VMASEANTVEKRTRADLCAEVGVKDDEKSSTLPLLSNVVTAYT-DRIKR 446
+ A E N + R +AD E GV +S L+SN Y+ +R+KR
Sbjct: 476 LQAIEVNASDSRGKADSKIEKGVGGSTSNSIKELISNATLNYSNNRLKR 524
>08_02_1600 +
28133818-28133900,28134240-28134345,28135169-28135255,
28135354-28135438,28135510-28135691,28135921-28135991,
28136078-28136168,28136250-28136324,28136436-28136537,
28136620-28136742,28136823-28136891,28136990-28137058,
28137158-28137211,28137315-28137368
Length = 416
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +3
Query: 297 AAVMASEANTVEKRTRADLCAEVGVKDDEKSSTLPLLSNVVTA 425
AAV A EA T K C ++ DEK+ + L NV +
Sbjct: 37 AAVAAEEAPTARKECYGVFCTTYDLRADEKTKSWKSLVNVAVS 79
>05_04_0164 + 18658203-18658529
Length = 108
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +3
Query: 135 LNKLSAEVRAKVTEILQERQNSTQKNPPPVP 227
+++L AEVR +I ++R + Q PPP P
Sbjct: 69 VSRLVAEVRELAVDIKRQRPPAAQPPPPPPP 99
>03_05_0697 + 26888791-26888861,26890468-26890579,26891561-26891757,
26892215-26892266,26893530-26893795,26894007-26894229,
26895154-26895327,26895408-26895485,26895566-26895817,
26896138-26898204,26899477-26901322,26901474-26901574,
26902179-26902535,26902681-26902799,26903558-26903559,
26903630-26903662,26903709-26903841,26904285-26904537,
26905688-26905912,26906401-26906466,26907373-26907471,
26908528-26908545,26908546-26908893,26909878-26910354
Length = 2522
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/71 (21%), Positives = 33/71 (46%)
Frame = +3
Query: 15 ILVQVNCTETYYYFKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEVRAKVTEILQERQ 194
I++ N T + N + +++ E+ + DG+++ + E + ++ + +
Sbjct: 1272 IVLYFNETTWKFLATTNPYEKVDRLQIVSEYMEIQQTDGHVDVSAKEFKMYISSLASMMK 1331
Query: 195 NSTQKNPPPVP 227
N T K PP VP
Sbjct: 1332 NCTLKVPPGVP 1342
>04_03_0521 + 16765347-16767324,16769202-16769392
Length = 722
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/93 (22%), Positives = 35/93 (37%)
Frame = +3
Query: 48 YYFKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEVRAKVTEILQERQNSTQKNPPPVP 227
Y + EN E + ++ L R+G + L A +L+ + T PP +
Sbjct: 633 YLSIIGENNLTLEASTISLLASLFSREGMIKGLFGTAPAPAPALLELELSQTVSAPPKLG 692
Query: 228 NEEVSLINHLVLEYLEWNGYLYTAAVMASEANT 326
E + LE W +Y A + S N+
Sbjct: 693 VELGGALTQNELELWSW---VYAAPQLHSRPNS 722
>05_03_0376 -
13252220-13252354,13252433-13252541,13253279-13253337,
13253608-13253700,13254078-13254153,13254405-13254467,
13254535-13254629,13254743-13254845,13254930-13255024,
13255098-13255156,13255445-13255656,13256090-13256222,
13256691-13257081
Length = 540
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +3
Query: 72 KSFSEKEMLIVIKELLKR-DGYLNKLSAEVRAKVTEILQERQNST 203
K +EK + +K +K+ + L++L A + K TEI Q R+NST
Sbjct: 134 KISTEKNTIKCLKNDIKQLNNKLSELQALLEMKETEISQLRRNST 178
>04_04_0942 - 29551856-29552344,29552569-29552934,29553985-29554203
Length = 357
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +3
Query: 240 SLINHLVLEYLEWNGY 287
SLINHLV+ +WN Y
Sbjct: 125 SLINHLVIIAFDWNAY 140
>02_05_0684 -
30880527-30880753,30881952-30882124,30882687-30882754,
30882860-30882973,30883281-30883438,30883516-30883654,
30883851-30883907,30884064-30884140,30884324-30884462,
30884590-30884668,30885047-30885174,30885269-30885352,
30886072-30886191,30886274-30886375,30886470-30886617,
30887404-30887749,30887851-30887968,30888309-30888370,
30888798-30888947,30889049-30889169,30889269-30889319,
30889427-30889567
Length = 933
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +3
Query: 138 NKLSAEVRAKVTEILQERQNSTQK 209
+K+SA+ AK+ E+LQE N+ ++
Sbjct: 798 SKISAQTNAKIEELLQEDHNAKRR 821
>01_05_0417 - 21961780-21962157
Length = 125
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +3
Query: 129 GYLNKLSAEVRAKVTEILQERQNSTQKNPPPVPNE 233
G + L E+ + EI RQ Q PPP P +
Sbjct: 89 GVIRNLQQELASVKAEIAAIRQKQQQAQPPPPPED 123
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,406,083
Number of Sequences: 37544
Number of extensions: 303268
Number of successful extensions: 865
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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