Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6e01
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35639-6|CAA84698.2| 322|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical p... 28 4.7
Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical p... 28 4.7
Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical pr... 28 4.7
AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like ... 28 4.7
AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical... 28 4.7
Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z35639-6|CAA84698.2| 322|Caenorhabditis elegans Hypothetical
protein D2045.7 protein.
Length = 322
Score = 36.3 bits (80), Expect = 0.013
Identities = 22/70 (31%), Positives = 34/70 (48%)
Frame = +3
Query: 36 TETYYYFKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEVRAKVTEILQERQNSTQKNP 215
T++ + K NEN+ SEK + +IK +L D E+RAKV +L +
Sbjct: 248 TQSPHMIKWNENRHISEKS-INLIKSILIVDPNQRPTIGELRAKVDNLLANFDTPEEAEN 306
Query: 216 PPVPNEEVSL 245
P + +EE L
Sbjct: 307 PEITDEEFDL 316
>Z29094-14|CAJ43434.1| 893|Caenorhabditis elegans Hypothetical
protein C07A9.3c protein.
Length = 893
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 54 FKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEV---RAKVTEILQERQNST 203
F + +N+S SEKE +I +++ YLN+ S + K IL E N++
Sbjct: 676 FYLKQNRSISEKEARSIIMQVVSALVYLNEKSTPIIHYDLKPANILLESGNTS 728
>Z29094-10|CAD45580.2| 965|Caenorhabditis elegans Hypothetical
protein C07A9.3b protein.
Length = 965
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 54 FKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEV---RAKVTEILQERQNST 203
F + +N+S SEKE +I +++ YLN+ S + K IL E N++
Sbjct: 743 FYLKQNRSISEKEARSIIMQVVSALVYLNEKSTPIIHYDLKPANILLESGNTS 795
>Z29094-9|CAA82347.3| 960|Caenorhabditis elegans Hypothetical
protein C07A9.3a protein.
Length = 960
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 54 FKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEV---RAKVTEILQERQNST 203
F + +N+S SEKE +I +++ YLN+ S + K IL E N++
Sbjct: 743 FYLKQNRSISEKEARSIIMQVVSALVYLNEKSTPIIHYDLKPANILLESGNTS 795
>AY450852-1|AAR18092.1| 960|Caenorhabditis elegans Tousled-like
kinase protein.
Length = 960
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Frame = +3
Query: 54 FKMNENKSFSEKEMLIVIKELLKRDGYLNKLSAEV---RAKVTEILQERQNST 203
F + +N+S SEKE +I +++ YLN+ S + K IL E N++
Sbjct: 743 FYLKQNRSISEKEARSIIMQVVSALVYLNEKSTPIIHYDLKPANILLESGNTS 795
>AC006834-10|AAF40005.1| 745|Caenorhabditis elegans Hypothetical
protein ZK973.1 protein.
Length = 745
Score = 27.9 bits (59), Expect = 4.7
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 1/104 (0%)
Frame = +3
Query: 135 LNKLSAEVRAKVTEILQERQNSTQKNPPPVPNEEVSLINHLVLEYLEWNGYLYTAAVMAS 314
+++L+AE AKV +LQ T+ PPP +V I L E + T +
Sbjct: 636 ISRLTAE-EAKVLNLLQNLTLKTKMKPPPPLRTKVGQIRDLA----EGQRFTGTVSNKTD 690
Query: 315 EANTVEKRTRADLCAEVG-VKDDEKSSTLPLLSNVVTAYTDRIK 443
++ D A + KD S LP +++ V D+I+
Sbjct: 691 FGVFIDIGVGQDGLAHISHFKDGHYSLMLPSVNDSVEVVIDKIR 734
>Z69634-5|CAA93456.1| 731|Caenorhabditis elegans Hypothetical
protein B0001.7 protein.
Length = 731
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = +3
Query: 165 KVTEILQERQNSTQKNPPPVPNEEVSLINHLVLEYLEWNGYLY 293
++ E ++ER N ++PP +P+ ++ V E YLY
Sbjct: 228 EIAEFIRERHNKENESPP-LPSNSIARHAGFVTEVFPQKNYLY 269
>Z96047-8|CAC42278.1| 507|Caenorhabditis elegans Hypothetical
protein DY3.4b protein.
Length = 507
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = +3
Query: 99 IVIKE---LLKRDGYLNKLSAEVR 161
IVIKE LL RDGYLN L+ E++
Sbjct: 160 IVIKEERVLLWRDGYLNILTKEIK 183
>Z96047-7|CAB09413.1| 561|Caenorhabditis elegans Hypothetical
protein DY3.4a protein.
Length = 561
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/24 (62%), Positives = 18/24 (75%), Gaps = 3/24 (12%)
Frame = +3
Query: 99 IVIKE---LLKRDGYLNKLSAEVR 161
IVIKE LL RDGYLN L+ E++
Sbjct: 214 IVIKEERVLLWRDGYLNILTKEIK 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,668,690
Number of Sequences: 27780
Number of extensions: 268865
Number of successful extensions: 854
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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