Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d23
         (617 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93778-7|CAB07847.1|  800|Caenorhabditis elegans Hypothetical pr...    33   0.22 
Z81532-9|CAB04328.1|  800|Caenorhabditis elegans Hypothetical pr...    33   0.22 
U73476-1|AAB41492.1|  800|Caenorhabditis elegans cyclic nucleoti...    33   0.22 
AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical...    31   0.50 
U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase ...    31   0.66 
U80839-12|AAB37918.1|  252|Caenorhabditis elegans Hypothetical p...    30   1.5  
Z68336-3|CAA92735.1|  710|Caenorhabditis elegans Hypothetical pr...    29   2.7  
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ...    27   8.1  
AC006714-14|AAK29720.2|  264|Caenorhabditis elegans F-box a prot...    27   8.1  

>Z93778-7|CAB07847.1|  800|Caenorhabditis elegans Hypothetical
           protein F36F2.5 protein.
          Length = 800

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 27/101 (26%), Positives = 43/101 (42%)
 Frame = +3

Query: 267 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 446
           P +++ F LLD     K      R L   P R P +   + + +     L  +   ++  
Sbjct: 43  PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100

Query: 447 LDGYLDPGESISAPSVFPYMKTKAEKQSEADDDEEIIYILQ 569
           LDG LDP  S  A S+     T+A    E D   +I +I++
Sbjct: 101 LDGRLDPASSFDANSL---SATRASSIIEDDVRSQISFIMR 138


>Z81532-9|CAB04328.1|  800|Caenorhabditis elegans Hypothetical
           protein F36F2.5 protein.
          Length = 800

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 27/101 (26%), Positives = 43/101 (42%)
 Frame = +3

Query: 267 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 446
           P +++ F LLD     K      R L   P R P +   + + +     L  +   ++  
Sbjct: 43  PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100

Query: 447 LDGYLDPGESISAPSVFPYMKTKAEKQSEADDDEEIIYILQ 569
           LDG LDP  S  A S+     T+A    E D   +I +I++
Sbjct: 101 LDGRLDPASSFDANSL---SATRASSIIEDDVRSQISFIMR 138


>U73476-1|AAB41492.1|  800|Caenorhabditis elegans cyclic
           nucleotide-gated channel protein.
          Length = 800

 Score = 32.7 bits (71), Expect = 0.22
 Identities = 27/101 (26%), Positives = 43/101 (42%)
 Frame = +3

Query: 267 PTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQI 446
           P +++ F LLD     K      R L   P R P +   + + +     L  +   ++  
Sbjct: 43  PRSEDSFDLLDPANASKEPSASTRPLPYPPTRPPEVVIQIDEVESPILGLIDETDDHE-- 100

Query: 447 LDGYLDPGESISAPSVFPYMKTKAEKQSEADDDEEIIYILQ 569
           LDG LDP  S  A S+     T+A    E D   +I +I++
Sbjct: 101 LDGRLDPASSFDANSL---SATRASSIIEDDVRSQISFIMR 138


>AF016430-10|AAB65374.1|  467|Caenorhabditis elegans Hypothetical
           protein C05C8.7 protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
 Frame = +3

Query: 318 NFKLPQRALYLDPYRRPLITFPMTQEDCKHFNLARKYKINQQILDGYLDPGESISAPSVF 497
           N+K+ ++  YL P  +      M   DCK F L R      Q ++  + P  ++   S+F
Sbjct: 315 NYKMTEQKDYLVPENKLTECVDMYAPDCKDFQLHRIRVGTHQTVEEMMIP--TLDCASIF 372

Query: 498 PYMKTKAEKQSEADDDEEII--YILQLPDYVYKCPLHS 605
             +  K   + EA  D ++I  Y ++  D  Y  P H+
Sbjct: 373 VVVSGKGTLE-EATIDNQLIGQYEVKRGDIFYIPPKHN 409


>U58752-1|AAB00664.1|  377|Caenorhabditis elegans P38 map kinase
           family protein 1 protein.
          Length = 377

 Score = 31.1 bits (67), Expect = 0.66
 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 6/115 (5%)
 Frame = +3

Query: 222 ASSEARTKPRPASAGPTTQNDFQLLDEEYIRKNFKLPQRALYLDPYRRPLITFPMTQEDC 401
           +S EAR   R  +    T+ DF+ L  +   +   L ++ L+LDP RRP     M  E  
Sbjct: 262 SSEEARNYIR--NLPKMTRRDFKRLFAQATPQAIDLLEKMLHLDPDRRPTAKEAMEHEYL 319

Query: 402 KHFN------LARKYKINQQILDGYLDPGESISAPSVFPYMKTKAEKQSEADDDE 548
             ++      +A +  +N  +    +D  + I    +  + K  A    E D+++
Sbjct: 320 AAYHDETDEPIAEEMDLNDDVRADTIDEWKKIIWEEISDFQKNVAFADEEEDEEK 374


>U80839-12|AAB37918.1|  252|Caenorhabditis elegans Hypothetical
           protein ZC204.12 protein.
          Length = 252

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
 Frame = +3

Query: 123 FQFCKMTSCCTCEGH-HSGAKSSLPLVCLVPRDGASSEARTKPRP-ASAGPTTQND 284
           ++ C M + C  E H   G+     +   +  + +S ++  KP+P A   PT +ND
Sbjct: 98  YEVCAMFTECETENHFEKGSDLRFEVELTIVMENSSKKSSVKPKPEAKQEPTKEND 153


>Z68336-3|CAA92735.1|  710|Caenorhabditis elegans Hypothetical
           protein F22B3.4 protein.
          Length = 710

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = +1

Query: 202 AWFLAMEHLRKPGQSPGLHQLGPQLKMISSCSTRSTSGKTLSCHRGRC 345
           A+ LA +  R PGQ     +  P L  I S ST  TS   +S  +GRC
Sbjct: 181 AFALAFKSSRFPGQLVASRRGSPLLVGIKSNSTLHTSHFPVSYSKGRC 228


>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
            protein Y8A9A.2 protein.
          Length = 1360

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 126  QFCKMTSCCTCEGHHSGAKSSLPLVCLVPRDGASSEARTK 245
            ++C   S C C G ++G ++    VCL PR    +  + K
Sbjct: 1313 RYC-FPSGCQCSGAYTGTQACANSVCLFPRTSCCAPYKKK 1351


>AC006714-14|AAK29720.2|  264|Caenorhabditis elegans F-box a protein
           protein 77 protein.
          Length = 264

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 262 LGPQLKMISSCSTRSTSGKTLSCH 333
           L   LK + +C+TRS   K LSCH
Sbjct: 102 LASTLKNLENCTTRSLLLKDLSCH 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,469,793
Number of Sequences: 27780
Number of extensions: 319359
Number of successful extensions: 1058
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)