Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d22
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.043
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    24   0.93 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   2.8  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   8.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.043
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 4/76 (5%)
 Frame = -1

Query: 440 FTYYFKQTIIPVFFFLEIAIAMSKI*SCCRT---TEQILILFCSLKFAFHI*DIPKLFYS 270
           FT +    +    FF    I    +  CC        +L L C   F  H+  +P ++Y 
Sbjct: 156 FTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFNMHLLFLLCLDYFTLHLLFLPCIYYF 215

Query: 269 HILFLV-TVHVFYRSV 225
           +  F++ T+H+ +  V
Sbjct: 216 YSAFIIFTIHLLFYCV 231



 Score = 23.8 bits (49), Expect = 0.93
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
 Frame = -1

Query: 347 TEQILILFCSLKF--AFHI*DIPKLFYSHILFLVTVHVFY 234
           T  +L L C   F  AF I  I  LFY  ++ L+ ++ FY
Sbjct: 203 TLHLLFLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFY 242



 Score = 22.6 bits (46), Expect = 2.1
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = -1

Query: 458 ILQINYFTYYFKQTIIPVFFFLEIAIAMSKI*SCCRTTEQILILFCSLKFAFHI*DIPKL 279
           +L ++YFT +        +F+    I    +   C     ++IL C   F +       L
Sbjct: 196 LLCLDYFTLHLLFLPCIYYFYSAFIIFTIHLLFYC----VLIILLCIYYFYYAF----IL 247

Query: 278 FYSHILFLVTVHVFY 234
           F  H+L LV ++ FY
Sbjct: 248 FTVHLLLLVCIYYFY 262



 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 281 LFYSHILFLVTVHVFY 234
           +F  H+LFL+ ++ FY
Sbjct: 274 IFTMHLLFLLCIYYFY 289


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
 Frame = -2

Query: 466 YNSFCK*TTLRIISNKRLFLYSFFWK--LLLL*AKYNRVVGPL--NKY 335
           Y  F    TL  I N   FLY+ F    LL++ ++Y R+   L  N+Y
Sbjct: 126 YEDFWHRYTLSFIENYCQFLYNCFHSTLLLMILSRYQRLKAQLWQNRY 173


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = +3

Query: 330 YQYLFSGPTTRLYFAHSNSNFQKKE 404
           ++Y F+   +  +F HS+S FQ+ +
Sbjct: 163 FRYHFNVHNSGTHFWHSHSGFQRSD 187


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +3

Query: 426 EIIRKVVYLQNE 461
           E+I ++VY QNE
Sbjct: 317 ELIHRLVYFQNE 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,452
Number of Sequences: 336
Number of extensions: 2570
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)