Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte6d22
(518 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A pro... 45 1e-04
BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A pro... 45 1e-04
AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snR... 45 1e-04
AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein. 45 1e-04
AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein. 45 1e-04
Z98304-8|CAM28265.1| 639|Homo sapiens zinc finger protein 182 p... 31 2.4
Z98304-7|CAC41951.1| 620|Homo sapiens zinc finger protein 182 p... 31 2.4
BC114216-1|AAI14217.1| 620|Homo sapiens zinc finger protein 182... 31 2.4
BC106875-1|AAI06876.1| 639|Homo sapiens zinc finger protein 182... 31 2.4
AB065535-1|BAC05781.1| 324|Homo sapiens seven transmembrane hel... 29 7.4
AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin rece... 29 9.8
>BC019272-1|AAH19272.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 457 MSYMLGHLHNGWQVDQAILS 516
MSYML HLHNGWQVDQAILS
Sbjct: 1 MSYMLPHLHNGWQVDQAILS 20
>BC001046-1|AAH01046.1| 142|Homo sapiens thioredoxin-like 4A
protein.
Length = 142
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 457 MSYMLGHLHNGWQVDQAILS 516
MSYML HLHNGWQVDQAILS
Sbjct: 1 MSYMLPHLHNGWQVDQAILS 20
>AF146373-1|AAF17332.1| 142|Homo sapiens thioredoxin-like U5 snRNP
protein U5-15kD protein.
Length = 142
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 457 MSYMLGHLHNGWQVDQAILS 516
MSYML HLHNGWQVDQAILS
Sbjct: 1 MSYMLPHLHNGWQVDQAILS 20
>AF023612-1|AAB81951.1| 91|Homo sapiens Dim1p homolog protein.
Length = 91
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 457 MSYMLGHLHNGWQVDQAILS 516
MSYML HLHNGWQVDQAILS
Sbjct: 1 MSYMLPHLHNGWQVDQAILS 20
>AF023611-1|AAB81950.1| 142|Homo sapiens Dim1p homolog protein.
Length = 142
Score = 45.2 bits (102), Expect = 1e-04
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1
Query: 457 MSYMLGHLHNGWQVDQAILS 516
MSYML HLHNGWQVDQAILS
Sbjct: 1 MSYMLPHLHNGWQVDQAILS 20
>Z98304-8|CAM28265.1| 639|Homo sapiens zinc finger protein 182
protein.
Length = 639
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 189 NKKDNACSKLFEHTSIENVNSDEK 260
NK DN C+KLF HT E N K
Sbjct: 181 NKYDNGCAKLFFHTEYEKTNPGMK 204
>Z98304-7|CAC41951.1| 620|Homo sapiens zinc finger protein 182
protein.
Length = 620
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 189 NKKDNACSKLFEHTSIENVNSDEK 260
NK DN C+KLF HT E N K
Sbjct: 162 NKYDNGCAKLFFHTEYEKTNPGMK 185
>BC114216-1|AAI14217.1| 620|Homo sapiens zinc finger protein 182
protein.
Length = 620
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 189 NKKDNACSKLFEHTSIENVNSDEK 260
NK DN C+KLF HT E N K
Sbjct: 162 NKYDNGCAKLFFHTEYEKTNPGMK 185
>BC106875-1|AAI06876.1| 639|Homo sapiens zinc finger protein 182
protein.
Length = 639
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +3
Query: 189 NKKDNACSKLFEHTSIENVNSDEK 260
NK DN C+KLF HT E N K
Sbjct: 181 NKYDNGCAKLFFHTEYEKTNPGMK 204
>AB065535-1|BAC05781.1| 324|Homo sapiens seven transmembrane helix
receptor protein.
Length = 324
Score = 29.5 bits (63), Expect = 7.4
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Frame = -1
Query: 488 PLCRCPSI*LI--LQINYFTYYFKQTIIPVFFFLEIAIAMSKI*SCCRTTEQILILF-CS 318
PLC I L+ L + Y YY + P++FF A+++ + +C T L +F S
Sbjct: 38 PLCTMYIIFLVGNLGLVYLIYYEESLHHPMYFFFGHALSLIDLLTCTTTLPNALCIFWFS 97
Query: 317 LKFAFHI*DIPKLFYSH 267
LK + ++F+ H
Sbjct: 98 LKEINFNACLAQMFFVH 114
>AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin
receptor protein.
Length = 488
Score = 29.1 bits (62), Expect = 9.8
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 408 RNNRLFEIIRKVVYLQNELYARTSTQWLASRS 503
RNN ++ +RK + ELYA T+ WL SRS
Sbjct: 289 RNNYMYARVRKAL---PELYAFTACMWLRSRS 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,763,014
Number of Sequences: 237096
Number of extensions: 1229993
Number of successful extensions: 1885
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1885
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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