Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d22
         (518 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071048-1|AAL48670.1|  142|Drosophila melanogaster RE13747p pro...    45   5e-05
AE014134-734|AAF51017.2|  142|Drosophila melanogaster CG3058-PA ...    45   5e-05
AE014134-3362|AAF53979.2|  178|Drosophila melanogaster CG31624-P...    29   5.0  

>AY071048-1|AAL48670.1|  142|Drosophila melanogaster RE13747p
           protein.
          Length = 142

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +1

Query: 457 MSYMLGHLHNGWQVDQAILS 516
           MSYML HLHNGWQVDQAILS
Sbjct: 1   MSYMLPHLHNGWQVDQAILS 20


>AE014134-734|AAF51017.2|  142|Drosophila melanogaster CG3058-PA
           protein.
          Length = 142

 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 19/20 (95%), Positives = 19/20 (95%)
 Frame = +1

Query: 457 MSYMLGHLHNGWQVDQAILS 516
           MSYML HLHNGWQVDQAILS
Sbjct: 1   MSYMLPHLHNGWQVDQAILS 20


>AE014134-3362|AAF53979.2|  178|Drosophila melanogaster CG31624-PA
           protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 269 ENKITLECLRCERQISVSKIISIFVQWSYN 358
           EN     C +CE+ I+ S ++++ V+W  N
Sbjct: 119 ENLFAARCAKCEKPITDSAVLAMNVKWHRN 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,412,619
Number of Sequences: 53049
Number of extensions: 396431
Number of successful extensions: 794
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 787
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 794
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1908489216
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)