Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte6d21
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal glutath...    24   4.8  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   4.8  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    24   4.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.3  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   8.3  

>AY278448-1|AAP37005.1|  147|Anopheles gambiae microsomal
           glutathione transferase GSTMIC3protein.
          Length = 147

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 372 FFHVSFVGIRISLHFV 325
           FF  +F+G++I LHF+
Sbjct: 132 FFTTAFMGVQIVLHFL 147


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 305 TKQFLLSTKCKEIRIPTNE 361
           TK  LL +KC  ++I TN+
Sbjct: 66  TKHELLESKCNALKIETND 84


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
           protein I protein.
          Length = 1340

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = +3

Query: 534 IDFSVLRNVWDPTFEEKDFKYGTKQAIS 617
           +DF  LRN +D + +E++ K G +  +S
Sbjct: 509 LDFQELRNNFDLSIDEQEIKPGRQIELS 536


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +3

Query: 105 KIVYCVK*NVEDTAIKKQHYCHGRKMAVPIKYVRRL 212
           +I+YC   NVE   ++K ++  G ++A   + +++L
Sbjct: 436 RILYCFCRNVECKELEKSYHTFGAQIADVDERIKQL 471


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +3

Query: 150 KKQHYCHGRKMAVPIKYVRRLY 215
           +++HY   +K+   I+Y+ RLY
Sbjct: 213 EREHYIEFQKVCRDIEYLTRLY 234


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 669,551
Number of Sequences: 2352
Number of extensions: 13525
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)